Betta splendens (Siamese fighting fish): 114866902
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Entry
114866902 CDS
T08231
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114866902
03041 Spliceosome [BR:
bspl03041
]
114866902
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
114866902
Spliceosome [BR:
bspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114866902
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
114866902
NCBI-ProteinID:
XP_029024974
UniProt:
A0A6P7P611
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Position
12:complement(9559438..9566782)
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AA seq
385 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKST
NETTNTKQLSFDEVVSQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPMPQVQMPQQSTVSFPAQP
YSQWGQWYSNTQQIGQYVPNGWQMPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGGMV
EPGQGVNGTVLTNQAGMSTAGYHTH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctatatgtggggaatctttcccgggacgtgacggag
gcccttatcctggagttattcggccagattgggccctgcaagagctgtaaaatgatagta
gatacagcaggtcatgacccgtactgctttgtggagttctatgaacatagacatgccact
gccacaatcgcagcgatgaatggtcggaaaatactgggtaaggaggtgaaggtcaactgg
gccacgactccaaccagccaaaagaaagacacaagcagtcacttccatgtctttgttgga
gatctaagtcctgaaatcaccacagatgatataaaagcggcttttgctccatttgggaaa
atatcggattgtcgcgtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagagaatgccatacagcagatgggaggacagtgg
ctgggaggcaggcagatcaggaccaactgggccacaaggaaacctgctcccaaatctacc
aacgaaacaaccaataccaagcagctatcgtttgatgaggtggtgagtcagtccagcccc
agcaactgcactgtctactgtggaggagtcacaacaggcctcacagagcaaattatgaga
cagactttctcacctttcggacaaataatggaaattcgtgttttcccagacaaaggttat
tcatttgtgaggtttaactcccatgaagcagcagctcatgccatagtttctgttaacggc
acatccatagaaggatacgttgtgaagtgttactggggtaaagaaaccacagacatggtc
agcccgatgccgcaagtacaaatgccacagcagagcacggtgagcttcccagcgcagcct
tacagtcagtggggtcagtggtacagtaacacacagcagattggtcagtatgtgcccaat
ggatggcagatgcccagctatggtgtttatgggcagacctgggatcagcagggctacaat
catttacatgctggtgccggatggacaggagtgggcgcagtgagcaacggaggcatggtg
gagcccgggcagggagtgaacgggacggtgctaaccaatcaggctggcatgagcaccgcc
ggctaccacacccactga
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