Betta splendens (Siamese fighting fish): 114866915
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Entry
114866915 CDS
T08231
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114866915 (chd1)
03036 Chromosome and associated proteins [BR:
bspl03036
]
114866915 (chd1)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114866915 (chd1)
Chromosome and associated proteins [BR:
bspl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
114866915 (chd1)
SLIK complex
114866915 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
114866915
NCBI-ProteinID:
XP_029024995
UniProt:
A0A6P7P4L5
LinkDB
All DBs
Position
12:complement(10899837..10919529)
Genome browser
AA seq
1787 aa
AA seq
DB search
MAGRKEDESVSNSSGESSNSDDESGSGSGSASGSDSGSSSSSSSSRSSQSGSSDSGSGSD
SGSQSDSDTQKSKQKMELPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQQQQQQQQRQSS
SNSGSDEDSSSSDESDASSGSKRRTNSGCSDSGSVSGSASGSGSDSSAEDNSDETASDYE
PSHTIKSRKPPTKMSFRNGKKSSTQKKNKQKCSSSEDEDESYKKVASAGPRRQATVNISY
KEDEELKTDSDDLVEVLGEDVPQPEEDEFETLERVMDCRIGRKRATGSPTTVYAVEADGD
PNANFNPNKEAGEVQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKEQERKKW
LKAASPEDIEYLNCQEELMNDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECS
WEDGALIAKKFQKCINDYMSRNQSKTIPFKECKVLKQRPRFVPMKKQPSYIGGDGLELRD
YQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTICFLNYLFNEHQLYGPFLLVVPLSTLT
SWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHLHSKRLKFNILLTTYEILLKDKSFL
GSVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFHSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQK
QYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNKAEALQQL
IRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDLLAEYLRSRQFYFQRLDGSIKGEMR
KQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPFNKE
ELSAILKFGAEELFKEPEGEELEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVAN
FSMMEDEEIDMDSERSQRSWDDIIPEEQRRRMEEEERQRELEEIYMLPRMRNCAKQVNFN
ASEGRQSRNRRYSGSDSDSTSERKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGG
PLERLDAIARDAELVDKSEHDLKRLAETVHNGCLRTLRENPCGPEKTSGGRRGKMKGPTF
RISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSLL
IGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKHLSKKEA
QKQAGTAVSLKRKPRSKKSKTIKQTKAEEMIKSPSSEPASEKRSDDDEEEEDEIEEEKES
VQPSRRGRTERVLTEDEDDNDEEQEPEEVSSSGEREVKEKEIKKEKKEESWHMKETKEPK
EKKETKPLEPVHKQENVEKNEIKTEARDRTKKSSDVPVHITASGESVPVSEESEELDQKT
FSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPDHIKQ
WRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQETQAMEQNARNVNTHGYKHADIERLKEN
SHQDDSSRDSYSSERHHPSGRYHDGSSKESHKMSSGESRKRPYSSFSNGKDHRDHYRPDS
KDRDRDRDRDRQDRYYSESKHRKVEEFRSSRDYRLDSKDYSHSDHRASYRYHADWQTEQR
ASASGPRSPRDQRSPYDSRSPMGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcaaggaggatgaaagtgtcagcaacagcagtggagaatcaagtaattcc
gatgatgaatccggttctggatcaggcagcgcatcaggctctgactcgggctccagttct
agctcttccagcagcagaagcagccagtcaggaagcagtgactcaggaagtggctcagac
tctggtagccagtcagattctgacacacaaaaatccaaacagaagatggaattgccaaac
aagtcaaacattgatggagctgagttctggaagtccaacccgagtattctagcggttcaa
agatctgctatgctcaggaaacagcagcaacagcagcaacagcagcagcgacaaagctct
tcaaatagtggatctgacgaggactcctctagtagcgatgagtcagatgcatcaagtgga
tcaaaacggagaacaaattcaggttgttctgactctggatccgtttcgggatcggcaagt
ggctctggatcagactcctcagcggaggacaacagcgatgagacggcgtcagactatgaa
cccagtcacacaatcaagagccgaaaacccccaactaagatgagttttcgaaatgggaag
aaaagtagcacccagaaaaaaaacaaacagaagtgttcgtcttctgaagatgaggatgag
agctataagaaagttgcatccgctgggccacgacggcaggccacggtcaacatcagctac
aaagaggatgaggagctgaaaaccgactcagacgatctggtggaagttctgggtgaagat
gttccacagcctgaggaagatgagtttgaaacactggagagagtgatggactgcagaata
ggaaggaaaagagcaacaggaagtccaaccacagtgtatgctgtggaagcagatggagac
cccaacgccaacttcaatcccaataaggaggctggggaggtccagtatttgatcaaatgg
aaaaactgggcgcatatccacaacacctgggagacagaggagacactgaagctacagaat
gtaaagggcatgaagaagcttgataacttcaagaagaaggagcaggaaagaaagaaatgg
ttaaaggcagcttcaccagaggacattgagtatttgaattgtcaggaagaactgatgaat
gacctgcattctcaataccagctagttgagagaatcatcggacattcaaaccagaagtca
gcagctggttacccagactacctatgcaaatggcagggtttaccctactcggagtgtagc
tgggaagacggtgctctgattgctaaaaagttccagaaatgcatcaatgactacatgagc
agaaaccagtccaagaccattccattcaaagagtgcaaggttctcaaacagagacccagg
tttgtgcccatgaagaagcagccatcttacatagggggggatggactggagctccgggac
taccagttggacagtttaaactggatggcccattcctggtgcaaaggtaatagctgcatc
ctcgctgatgagatgggcttaggaaagaccatccagaccatctgtttcctcaactacctg
tttaatgagcatcagctctatgggcccttcttgttggttgtgcctctctccacgctgacc
tcttggcaaagagaaattcagctctgggcccctcagatgaacgttgtcgtctatctcgga
gacatcagcagcaggaacatgatcaggacacatgagtggatgcacctccatagtaaaaga
ttaaaattcaacattctcctcacaacatatgagattcttctcaaagataagtcatttttg
ggcagtgttaactgggccttcattggtgtggacgaggcacaccgactgaagaacgacgac
tccctcctctacaaaaccatgattgacttcaagtccaatcacaggcttttgattactggg
actccactgcaaaactccctgaaggagctctggtcactgcttcacttcattatgcctgag
aagtttcactcctgggagctgtttgaggaggagcacgggaagggcagagactcaggctac
accagtctacacaaagagttggagccgtttctactgcgcagagtcaagaaggacgttgag
aaatctcttcctgctaaggtggagcagatcctcagagtggagatgagtgctatccagaaa
cagtattacaaatggattctgaccaggaactacaaggctctgagtaaaggtaccaaaggc
agcacatcgggtttcctgaacatcatgatggagctcaagaagtgctgtaatcactgttac
ctcatcaagcccccagaggacaatgaattcctcaacaaagcagaggccctacagcaactg
atacgcagcagtgggaagctagttctgctggacaagctgctggtgcgactgaaagagagg
ggccacagagtcctcatcttctcccagatggttcggatgctggatctcctggcggaatac
ctgaggagcagacagttctattttcagagattagacggttccatcaaaggggagatgagg
aagcaggcactggatcattttaatgctgagggctctgaggatttctgcttcttgttgtcg
acacgtgcgggaggtttgggaatcaatctggcatcagccgacacagtggtcatctttgac
tcggactggaacccgcagaatgatttgcaagcgcaggccagagcccatcggattggacag
aagagacaggtcaatatctaccgtctggtgactaaaggctcagtggaggaggatataatt
gagagggcaaagaagaagatggtgctggatcaccttgtcattcagaggatggacaccaca
gggaaaaccgtcctccatactggtgctgctccctccagttctgcaccgttcaataaggag
gagctgtctgccattctcaagtttggtgctgaggaacttttcaaagagccagagggggaa
gaactggagcctcaggaaatggacattgacgagatcctcaaacgagcagagacgcgagag
aatgaccctggaccttccacagtgggagaagagttgctatctcagttcaaggtagccaat
ttttccatgatggaagatgaggaaatagatatggactctgagcggagtcagcggagttgg
gatgacatcattcctgaggagcagagaagaagaatggaagaggaagagcgacagagggag
ctggaggaaatctacatgctgccgcgcatgaggaactgtgctaaacaggttaactttaac
gctagtgagggtcggcagagtagaaacaggaggtactctgggtctgacagtgactccacc
tcagaaaggaaaaggccaaagaaaagagggcgtccaaggaccattccacgggaaaacata
aagggtttcagcgatgctgagattcgaaggtttgtcaagagttacaaaaaatttggagga
ccattagaaaggttggatgctattgctcgtgatgcagaactagtagacaagtctgaacat
gacctgaaacgcctggcagaaactgttcacaacggctgcttaagaacactacgggaaaac
ccctgtgggccggagaagacctcaggaggcaggagaggtaagatgaagggtcccacattc
aggatctctggagtccaggtaaatgccaagcttgtcatatctcacgaggaggagctggct
ccactgcataaggccattcctgctgaccctgaagagagaaagaagtacatgattccatgc
cactctaaggcggcacactttgacatcgagtgggggaaagaggacgactctagcctcctc
ataggaatttacgagtacggttatggcagctgggagatgatcaagatggacccagacctc
aatctgactcacaagctcctaccagacgaccctgacaagaagcctcaggccaaacagcta
cagaccagagcagactacctcatcaagctactcagcaagcatctgtccaaaaaagaagca
cagaaacaagcaggaacagctgtttcactgaagaggaaaccaagaagtaaaaagagcaag
acgataaagcagactaaggcagaggaaatgataaagagcccatcttcagaacccgcatca
gagaagaggtctgatgatgacgaggaggaggaggatgaaatcgaagaggaaaaggagtcg
gtgcaaccaagcagacgaggcagaacggagcgagtgttgacggaggacgaggacgacaac
gatgaggagcaagagccggaggaggtctcctcatcaggggagagggaggtcaaagaaaaa
gaaatcaaaaaagagaaaaaggaagaaagttggcacatgaaggagacgaaggagcccaaa
gagaaaaaagaaaccaagccactggagcctgtgcacaaacaggaaaacgtggaaaagaac
gaaataaagactgaagccagggaccgaacaaagaaaagctcagacgtgccggttcacatc
acagcaagtggggagagtgtgccagtgtcggaggagtctgaggagctggaccagaagacc
ttcagtgtgtgcaaggagcgcatgcgtccggtgaaagcagccctgaagcagctggacagg
ccagaaaaaggcctgtcggagcgcgagcagctggagcatacgaggcagtgcctcataaag
attggagaccacatcactgagtgtttgaaggagtactcaaacccggatcacatcaagcag
tggcggaaaaacctctggatatttgtttccaaattcaccgagttcgatgccagaaaactc
cacaaactatataagcatgcaatcaagaaaagacaagagacacaggccatggagcagaat
gcccgaaatgtcaacacgcatggctataaacacgcagatattgaaaggctgaaagagaat
tctcaccaggacgacagcagcagagacagctacagctcagaaagacatcacccctcaggt
cgataccatgatggcagcagcaaggagtcacacaagatgagttcaggagagtccaggaag
agaccttacagctccttcagcaacggcaaagaccacagagaccactacagacccgacagc
aaggacagagacagggacagggacagagacagacaggacagatactacagcgagagcaag
cacaggaaggtggaggagttccgcagcagcagagactatcggctggactccaaggactat
tctcactcggaccatcgtgcttcctaccgctaccacgcagactggcagactgagcagaga
gcctcagccagtgggccccgatctcctcgagaccagcgctccccctatgattcccgctca
cccatgggacaccgctccccgtttgactactcctcagaccacaagagcaccccagaacag
atctggagcagccgcaagacataa
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integrated database retrieval system
