Betta splendens (Siamese fighting fish): 114867117 Help Entry 114867117         CDS       T08231                                  Symbol col27a1a Name (RefSeq) collagen alpha-1(XXVII) chain A   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism bspl  Betta splendens (Siamese fighting fish) Pathway bspl04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:bspl00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     114867117 (col27a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bspl00536]     114867117 (col27a1a) Glycosaminoglycan binding proteins [BR:bspl00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    114867117 (col27a1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  114867117 NCBI-ProteinID:  XP_029025332 UniProt:  A0A6P7NZA1 LinkDB All DBs Position 12:complement(7309490..7357325) Genome browser AA seq 1749 aa AA seqDB search MNLGTRRRDCRTSHLDTKRALLLCTVLYCTCYLGLTQVHSEDVDILQRLGLKGEKPSRSL PAGVIPFRSGIILNQRAHVESPWRSVFPAAVWPNLALVLSVRSHRVNNAFLFTLLSSRRK LLLGLQLVPGSLVLHTGPNTSVALPYDPHDGQWHQLAVGVNGQKVTLYASCGEQSVHADF DGGLAPELQGSFLLGHTSQQQASPHFEGAICQFDLVPSAQAAHNFCRYIKKQCREADTYR PNLSPLLPILPREANITAATTKPGSRDTFRKSTGLNLARGVAAAASAVRYVAPTQTIKPF PGTIVMPFLPTVMPVTVQLGLASPPPKVRTGTVTAPLRTSVTPTKQPTQRPSTAKFSPPK PTPQNSSKRTTAVTDKKKTIPATTSTKPSKIKPDTALSDQGAVPKKPQPTTVKKPPSKPK ATPTKATPIKSKTQSVKVLPSKTTSKISPSKSTTSKPSTPKTSRPVSRQVTNPPKQAKTP KAPVTPRPTRSWYNTVTPPATDGFLSWEVPPTQFSLLAGPIGQKGEQGPLGLTGPPGKPG LPGKRGPRGDPGPHGNPGRPGPPGLKGRKGDPGMSPGPAPKGDKGDFGIIGPVGQTGPAG RAGQKGFPGPPGLPGEPGEQGPVGSPGAKGYPGRQGLPGPVGPEGPKGTRGFIGIPGLFG LPGPDGERGIPGEPGKRGKMGRPGFPGDFGERGPPGPDGEPGAMGAPGPNGVLGLIGDIG PVGEMGLPGPNGLKGVPGNPGEPGLKGDKGEIGIPGDQGEIGYKGDKGIQGAPGLMGIRG KPGPQGKTGEKGPDGAPGPPGPEGFPGDMGPPGENGLEGPKGKPGVRGLPGPRGVPGLEG DEGPLGPAGPTGLEGRMGRKGFPGKVGPEGVTGELGVAGKVGPMGERGLVGFIGPVGEAG LAGEKGDRGEMGLPGPPGEKGSTGHPGTPGETGPTGPTGRPGPSGASGPAGTRGPKGLRG ARGPDGPTGEMGLEGKKGLDGPPGKIGFPGPQGKIGDAGETGPKGFVGVPGPSGPPGDKG IAGVPGPTGAPGTVGLLGEIGQMGPPGKVGEPGLPGEPGEKGALGPAGNIGEQGLIGQRG EPGLEGEAGPAGPDGTKGDKGDLGQEGEKGEKGELGLKGKEGQLGSPGLTGVRGPEGKPG KIGERGKLGPKGAKGHQGHLGETGTVGKTGPPGFVGPKGSRGTIGHVGAPGRMGQQGEPG LSGYEGHQGPQGPIGPPGPKGEKGEQGDDGKVEGPPGRLGDIGPPGDRGERGEPGDPGYK GQVGLDGERGRPGAPGLPGEPGPRGQQGPKGAKGDQGQKGKKGHTGQKGTRGSEGGGGAS GPRGVVGREGQEGVPGMDGVPGKDGSKGMPGEHGDDGEAGLHGKSGSRGKTGAPGLPGDQ GGIGPKGERGLPGQSGAAGKKGFRGGMGMPGSQGDRGPKGQPGDIGEPGFPGILGVFGPK GPPGDFGPKGIRGPKGPQGTMGRGGVTGPVGIIGPSGSAGPRGEKGNRGETGLQGPRGSP GPRGPPGPPGPPSIPSKFKEDGLIFVESHTSLRTENKPVMDLPMLDQGAEIFKTLHYLSN LIQSLKNPLGTQDNPARICRDLHSCEQKLNDGTYWIDPNLGCSSDPIEVSCNFTGGGQTC LKPITVSKPTVSVGHVQMNFLHLLSSEAVQHIIIHCLNVTVWRPTEHRPADQGSVRFKAW SGDVFEVGGELEPEVTEDSCWVKDGRWHQTHFVFHSFDPTLLPVVDIYNLPNTTPGSHYH LEVGPVCFL NT seq 5250 nt NT seq  +upstreamnt  +downstreamnt atgaatttaggcacccgaaggagagattgcagaacctctcacctagacacaaagagagcc ctattgctctgtaccgttctatattgtacttgttacctgggacttacacaagtacactct gaagatgtggacatcctccagaggttggggcttaagggagagaaaccgtctcgctcgttg ccagcaggggttattccattcagatctgggatcatcctcaaccagcgggcacatgtcgag tctccatggcgctcagtcttcccagctgccgtctggcccaacctggctcttgtcttgagc gtgcgctcacaccgtgtcaacaatgctttcctcttcacccttctctcaagccgcagaaaa ctcctacttggcctgcagcttgttccaggcagtctggtccttcacacaggaccaaacacc tctgtggcgctgccctatgatcctcatgatggtcagtggcaccagcttgcagttggagtt aatggacagaaagtgactctatatgcctcctgcggagagcagagtgttcatgcggacttt gatgggggtctggctcctgagctccagggctccttcctgctgggacacacgagccagcag caagcctcaccacactttgaaggagccatctgccaatttgacctggtcccttctgcacag gcagctcacaacttctgcaggtacattaagaaacagtgcagggaagcggacacatatagg ccgaacctttctccgttgctgccaattttaccacgcgaagcgaacatcacagctgctacc actaaacccggtagccgagacacgttcaggaagtccacagggctgaaccttgccaggggt gttgctgctgctgcctccgctgtcagatatgttgcccccacccaaacaataaagcccttt cctgggaccatcgtgatgccctttttgccaactgtgatgccggtcacagtccagcttggt ttagcctccccacctcccaaggtcaggactggaactgtcacagcaccactcaggacaagt gtaacccccacaaaacaacccacccaacggccctccactgctaaatttagtcccccaaag cccactcctcagaacagctcgaaaagaacaaccgcagtgacagacaagaaaaaaactatt ccagccactaccagtacgaaaccctccaagataaagccagacactgccctgtcagaccaa ggtgccgtaccaaagaaaccacaacccaccacagtcaagaaaccgccttctaagccgaaa gctacaccaaccaaagccactccgatcaaatccaaaacacaatctgtcaaagtcctccct tctaaaaccacatccaaaatcagcccctcaaagtcaacaacgtccaaaccttctactcct aaaacctccaggccagtctccagacaggtcaccaatccaccaaagcaagctaagacaccc aaggctccagtaaccccacgacctaccaggtcttggtacaacacagtaacaccacctgct actgatggcttcctgagctgggaggtgccacctactcagttctctctgctggctggaccc ataggacagaaaggagaacaaggcccactgggactgacaggacctccagggaagccgggc ctgccaggcaagagaggtcctaggggtgaccctggtccccacggaaatcctggccggcct ggtccccccggactcaaggggagaaaaggagaccctggcatgtcacctggtccagcacct aaaggagacaagggggactttgggatcattggtccggttggacagactggcccagcagga cgagcgggtcagaaaggtttccccggtccacctggcctccccggggagcccggcgagcaa ggcccagtcggaagcccaggtgccaaaggttatcctggcaggcagggtttaccagggcct gtaggaccagaggggcctaaaggcactcggggttttattggcatcccggggctttttggt ctgcctgggcctgatggcgagagaggcattcccggcgaaccagggaagaggggcaagatg ggtaggccggggtttccgggggactttggggagagaggaccacctgggccagatggagag ccaggtgcgatgggagcccctggtccaaacggagttcttggacttattggtgatatagga cctgtgggagagatgggccttccaggacctaatggactgaagggggtgcccggaaatcca ggagaaccaggactgaaaggtgataagggtgaaattggaattcctggagaccaaggagaa atcgggtacaaaggcgacaaggggatccaaggagctccagggttaatgggtatccgtggg aaaccaggaccgcagggtaaaactggagagaagggccctgatggtgcacctggaccccca ggacctgagggtttccctggcgacatgggcccaccgggggagaacggccttgaaggacca aagggaaaaccaggggtcagaggtttaccagggccaagaggggtgcctggcttggaggga gatgagggcccgcttggcccagcaggcccaacaggactcgagggtagaatgggaaggaaa ggtttccctgggaaggttgggccagagggagtcacgggggaacttggtgtcgcaggaaaa gttgggcccatgggagaaagaggcttggtgggtttcatcggaccagtgggagaggctgga ctggcaggagagaagggggatagaggagagatgggccttcccgggcctcctggagaaaag ggatctacgggtcacccagggacaccaggcgagaccgggcctactgggccaacaggaaga ccaggcccctctggagcatcggggccagccggcaccaggggacccaaaggcctgcgggga gcgagggggcctgacggtccaacaggagagatggggttagagggcaagaagggtctcgat ggtcctccaggaaaaataggtttccctggtccacagggaaagatcggcgatgcgggcgaa actggacctaaaggttttgttggcgttccaggaccttcgggacccccaggggacaaggga atagcaggcgtaccgggaccaactggggcaccaggaactgtgggactgttgggagagatt ggtcaaatggggcctccaggcaaagtgggggaaccaggactaccaggggaacctggagag aagggagcccttggacctgctggaaacatcggagagcagggactaataggacagagggga gagccaggcttagagggagaggctggtccagctggtccagatggaacaaagggtgataaa ggcgatttgggtcaggagggtgaaaaaggagaaaaaggtgaacttggactaaagggaaaa gagggccaacttggaagtccggggctcactggcgtcagaggtccagaagggaaacctggt aaaatcggggaaagaggaaaactagggccaaagggtgccaaaggccatcaaggtcacctt ggagagaccggaacggttgggaagacagggccaccaggctttgttggtccaaaggggtcc agaggaactattggacacgtgggggctccagggcgaatgggtcaacaaggggaacctggt ctgtcaggttatgagggtcatcagggtccacagggccccattgggcctccaggaccaaaa ggtgaaaagggtgaacagggggacgatgggaaagtagaagggcctcctggtcgtctaggt gacattggtcctccaggtgacagaggggagagaggggaaccaggagatccaggctataaa ggccaagttggtctggacggagagagaggtagacctggagctcctggactacccggagag cccggacctcgagggcaacagggaccaaaaggggccaaaggagatcaaggtcaaaaaggc aaaaaaggtcacacaggacaaaaaggaaccagaggctcagagggtggtggtggcgcttct ggtcccagaggtgtggtaggccgggagggacaggagggtgttcctggcatggatggtgtg ccagggaaggatggcagcaaaggcatgccgggagagcatggtgacgatggagaggctgga ctacatggcaaatctggctctcgtgggaaaaccggagctccaggactcccaggagatcag ggaggcattggaccaaagggagagcggggtcttccaggtcaaagtggagctgctggaaag aaaggcttcagaggaggaatggggatgccagggtcacagggagaccgaggacccaaagga cagcctggtgacataggggaaccaggttttccagggattctgggagtatttggacctaag ggccctccaggagactttgggccaaagggcattcggggaccaaaggggccacagggcacg atgggcagaggaggagtaactggccctgtgggaattattggccccagtggaagtgcaggt cctagaggagagaagggcaatcgtggagagactggattacaaggaccaaggggatcccct ggacctcgtggaccccctggacctccgggtcccccgagtatcccttcaaaatttaaagaa gatggtcttatatttgtggaatcacacacctcactcaggactgagaataagccagtaatg gacctgccgatgctggaccagggtgcagagatctttaaaaccctccactacctcagtaac ctgatccagagcctgaagaaccctctgggcacacaggacaaccctgcccgcatctgcagg gacctgcacagctgtgaacagaagctaaatgatggcacttactggattgaccccaacctg ggctgctcatcagacccaatagaagtctcttgcaactttactggaggtggacagacttgc ctgaaaccaataacagtgtccaagccaacagtcagcgtcggccatgtccagatgaacttt ctgcatctgctgagctcagaggccgtgcagcacatcatcattcactgcctgaacgtcacg gtttggaggccgactgagcatcggccggctgaccaagggtctgtgagattcaaagcctgg agtggggatgttttcgaagtgggaggagaactcgagccagaggtcacagaggactcctgc tgggtaaaagatggccgctggcaccaaactcattttgtgttccactcattcgaccccacc cttctccctgtggtcgacatctacaacctcccgaacaccacacctggctcgcattaccat ctagaagtaggtcctgtgtgcttcctgtga

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