Betta splendens (Siamese fighting fish): 114867294
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Entry
114867294 CDS
T08231
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114867294 (lrsam1)
04121 Ubiquitin system [BR:
bspl04121
]
114867294 (lrsam1)
Enzymes [BR:
bspl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114867294 (lrsam1)
Membrane trafficking [BR:
bspl04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
114867294 (lrsam1)
Ubiquitin system [BR:
bspl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114867294 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
zf-C3HC4_3
LRR_4
SAM_2
LRR_1
SAM_1
Prok-RING_4
zf-RING_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
114867294
NCBI-ProteinID:
XP_029025702
UniProt:
A0A6P7P086
LinkDB
All DBs
Position
12:complement(12843508..12859231)
Genome browser
AA seq
737 aa
AA seq
DB search
MPLFFRKKKPSEDSQKRLEYQLCLSKEAGADDTLDISSCELSEVSSSVFSICKVLQKKVL
ILHNNELRSLLPKGCDICTLATLKVLDLHDNRLTSLPEDIGKLVTLQILNVEKNLLKALP
DSIGDLKLLQTLNLKGNCLSALPSTVGSLSSLRTLDFSDNSIVQIPKELAYIRTLESLTL
DAAVMSYPPASVCTEGTESIQRFLCAELGEEYCPPSQYLLPVLENDSNSSKQSSDCFDGL
EEMWQNKFSNYEKRKEQKQQEKLAFERHLEMKQREHTHLLLMNNSRKENILNSVRQEQER
LEQGVTQQQKAQETERIQILEKIRKAEDSISNRISNMLMDNNRQAKTAEFVQAMEEDRIR
MEQLTAITHEEASSLRQREVAAAMQRMLSDSCFMNLLQEASDCRRRNLVSEACRSMENMD
RKFEKVLSLQVLDKSKAITQILQEEEMQKAAFQALQLQKDAVHGYIRNQIKLIEAELMQL
TKLEIKRRSLDTENLQQEFLVEQRTALGDLLQQLLKQRDQREVELRQILVELELKSESNQ
QNYWMIQYQRLLDAKPLSLRMQEAGVEKELVNLMCKMSAQHYLPIFAHHRVTTEALRHMT
SSDLKKLGINEIGIQKALLNWAQNHHPEGACKVVPQDDAPEFFPTTPPPSSPLFFSNTLT
IQNPSPPLTPGTPVTPSAPSPVEGPGRSECVVCMETGSQIIFLPCGHVCCCQVCSNALQN
CPLCRSTISQRIHLFYS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttcttcagaaagaagaaacccagcgaggactcccagaagagactggaatat
cagctttgcttgtctaaggaggcaggagctgatgacaccctggacatctcatcatgcgag
ctctcagaggtttcttcgagtgtcttttctatttgcaaagttctacagaagaaggttctg
atccttcataacaatgaactgagatctctgctgcccaaaggatgcgacatctgcactctt
gccactttgaaggttctggatctgcatgataataggcttacctcactcccagaagacatt
gggaagctagtgaccctgcagattttgaatgtggagaagaatcttttgaaggctctgcca
gactccattggggatctgaagcttttgcagacacttaatttgaagggcaactgtctcagt
gcgctgccgtcgacagttggctctttgagcagcctgcgcacgctggacttcagcgacaac
agcattgtccagatccccaaagagctggcctacatccgcacccttgagagccttacgctt
gacgccgcagtgatgtcctacccacctgcatctgtgtgcacagagggcacagaaagcatc
cagcgctttctctgtgcagagctgggagaggaatactgccccccgtcccagtacctctta
ccagtcctggagaatgactcaaactctagcaaacagagctctgattgcttcgatggcttg
gaggagatgtggcagaacaaattcagtaactacgaaaagagaaaggagcagaagcagcag
gagaaacttgcctttgagcggcatctggagatgaagcaaagggaacacacacatcttcta
ctcatgaataactctcgcaaggaaaacattctgaactcagttcgacaggagcaggaacgt
ttggagcagggtgtcacacagcagcagaaagctcaggagacagagaggatacagattcta
gaaaaaatccgaaaagctgaagacagcatcagtaatcgtatcagcaacatgctaatggac
aacaacaggcaagcaaagactgcagagtttgttcaagccatggaggaagatcggattcgt
atggagcagctaacagctatcacacatgaggaggccagttcactgaggcaaagggaggtg
gcagcggccatgcagcgcatgctgtcagacagctgttttatgaacctccttcaggaggcc
agtgactgccgcagacggaacctggtctctgaggcctgccgaagcatggagaatatggac
aggaagtttgagaaggtgctgtccctccaggttctggacaaatctaaagccattactcaa
atcctacaggaggaggagatgcagaaagcagcgttccaggctctgcagctgcagaaggat
gctgttcacggctacattcgcaatcagatcaagcttatagaggctgaattaatgcagttg
actaaactggagattaaaagacggagtctggatactgagaacctgcagcaggagtttttg
gtggagcagcgcacagctttgggcgacttgttgcagcagctgctgaagcagagggaccag
agagaagtggagctgcggcagattctggtggagttggagctcaagtcagaatccaaccag
cagaactactggatgatccagtaccagagactactggatgccaagcccttgtcgctgcgc
atgcaggaagcaggcgttgagaaggagttggtcaatctgatgtgtaagatgtctgctcag
cactacctgcccatctttgcccatcatcgagtgacgactgaggctcttcgccacatgacg
tcctctgacctcaagaagctcggcattaatgaaataggaatccagaaggctcttctgaac
tgggctcagaatcatcatcctgaaggggcctgtaaggttgtgccacaggacgatgcacca
gagttcttccccacaactccacccccttcctcccccctgttcttctccaatactttgacc
atccagaatcctagcccaccactcacccccgggacccctgtcactccctcagcacccagt
cctgtggagggaccaggacgctctgaatgtgtggtctgcatggaaactgggtctcagatc
atcttcctgccctgcggccatgtctgctgctgccaggtctgcagcaacgctctgcagaac
tgtcctctgtgccgcagtaccatatcccagcgcatccatctcttctacagctag
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