Betta splendens (Siamese fighting fish): 114867432
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Entry
114867432 CDS
T08231
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114867432 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114867432 (nup54)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114867432 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
FAM92
Motif
Other DBs
NCBI-GeneID:
114867432
NCBI-ProteinID:
XP_029025926
UniProt:
A0A6P7P120
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Position
12:complement(7179481..7185104)
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AA seq
624 aa
AA seq
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MAFSFGGATSNPAASNSGFSFGSFGAKTTASSAFGFGTAPTTTTAASGFGTLTAPSFGAA
ATTTTAAAPATGFSFGSTNTGFGGLGAGNTTAGGFSFGGFGLNANPAAVSFNVGCFGTAT
TTGTVFNFGNSLASTGAFGGFGTTTTSAAAPGSTFSFATPSNTTGSLFGNTQNKGFGFTS
GLGTGTATGTAGFGTGLGTTGLGGFGGFNIQPNQQQQGGLFGQQAQQQAQPTQLYQQVTA
LSAPTLLGDERDSILAKWNQLQAYWGTGKGFYSNNNPPVDFTQENPFCRFKAVGYSCVPQ
SKDEDGFVVLVLNKKEADVRAQQQQLVESLHKVLGSNQTLTVNVDGVKSLPDDQTEVVIY
VVERSPNGTSKRLPSTTLFGYLEQANIKVQLTQIGVAMSITRTELSPAQLKQLLQNAPGG
VDPIIWEQAKVDNPDPERLIPVPMVGFKELLRRLQIQEQMTKQHQTRVDIIANDISELQQ
NQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRKSGYAIQVDEEHLRVQLDTIQSELNA
PTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDADLLREIRQHLKQQQDGLSHLISVIKD
DLEDIKLIEHGLSDSGHMRGGILS
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagttttggcggcgccacgagtaacccagcggcaagcaattccgggttctcg
tttggttcatttggtgccaagaccacagcatcatctgcttttggctttggcaccgcaccg
accaccaccaccgccgcatccggattcggcactctcacagctcctagttttggggcagcc
gccaccaccaccactgctgctgcacccgccacgggatttagttttggctccaccaacact
ggatttggggggctgggagctggaaacaccacggctggtgggtttagttttggagggttt
ggtttaaatgccaacccagcagcagtcagctttaatgtggggtgctttggtacagctacc
actactggcactgttttcaattttggtaatagcctggctagcacaggtgcgtttggcgga
tttgggactactacaactagtgctgctgcaccagggtccactttcagctttgctactccc
tccaacaccacagggagcctttttggtaacacacagaacaaagggtttgggttcacctct
ggactcggcactggtacagctactgggaccgcaggatttggaacaggattaggaaccact
ggcctgggtggatttggaggctttaatatccagccaaatcagcagcagcaaggaggtttg
tttggccagcaggcccagcagcaggctcaacctacccagctttaccagcaggttactgct
ctgtcagctcccacattgttaggagacgagcgggactccatcttagccaaatggaaccaa
ctgcaggcttactgggggactgggaagggcttctatagcaacaacaacccgccagtggac
tttacccaggaaaaccctttctgtagatttaaggcagtgggctatagctgcgtcccacag
agtaaggatgaagatggttttgtggtcttggttctcaataaaaaggaagctgatgtgcga
gcgcagcagcagcagctggtggagtcgcttcacaaggtccttggaagtaaccagacactc
actgtcaatgtagacggggtcaagtccttgccagatgaccagacagaggtggtcatttac
gtggttgagcgttctcctaacggcacttctaagcgtcttccttccaccacgctcttcggt
tacctggagcaggccaacattaaggttcagcttacacagattggggtggccatgtccatc
acacgcacagagctgtctccagcacagctcaagcagctgttgcaaaatgctcctggagga
gttgaccccatcatttgggagcaggccaaggtggataaccctgacccagagaggttaatt
ccagttcccatggtgggttttaaggaactcttgcgcaggctccagattcaggagcagatg
accaagcagcaccaaaccagagtggatattattgcaaatgacatcagtgaactgcagcag
aaccaggcaaccactgtggccaagattgcccagtacaagaggaagctgatggatctctct
cacagggtgctccaggtgctaattaaacaagagattcagaggaaaagtggttatgctatc
caagtggacgaggagcatctccgagtgcagctggacaccattcagtctgaactcaatgca
cccacacagttcaagggtcgcctgaatgaactaatgtctcaaatccggatgcagaaccat
tttggagccgtgagatcagaagagcggtacagcgtcgatgcagacctcctcagagaaatc
agacaacacttgaagcagcaacaggatggcctaagtcatttgatcagtgtcatcaaagat
gacttggaggacatcaaactcatagagcatgggttgagcgacagtggacacatgagagga
ggcatcttgagctga
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