Betta splendens (Siamese fighting fish): 114867485
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Entry
114867485 CDS
T08231
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04137
Mitophagy - animal
bspl04140
Autophagy - animal
bspl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114867485 (hif1al)
04137 Mitophagy - animal
114867485 (hif1al)
04148 Efferocytosis
114867485 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114867485 (hif1al)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114867485 (hif1al)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-GeneID:
114867485
NCBI-ProteinID:
XP_029025988
UniProt:
A0A6P7P718
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Position
13:complement(19664093..19673063)
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AA seq
672 aa
AA seq
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MDTKDEAVEMKRSSSEQRKLRSRDAARCRRGQETEVFYELARTLPLPRRVSTHLDKAAIM
RVALSFLRMRRLLRPGEEHKEEADVQEEEEEEEEEDPMDCFYPQALAGFIVVLSEEGDVI
YLNDSVSKHIGITQLELLGQSIYDFVHPCDQEELRDLLAPRPGLTKKSPLQSERNFFLRV
KSTLTSRGRTVNLKSATWKVLHCTGHMRPFGDGSTSPPAARVMTLLCEPVPHPSSVEFPL
DSCTFLTRHSMDLRFTHCEGRVTELVGYSPDDLIGRSAYELYHALDSDHMKKSLHTLLSK
GQVSTSLFRFLANGGGFVWAQTQATVLYGSKTSQPEAVVCLNFILSAVQQPGVVLSVEQT
RCRPQLKAEPPSPAAPEGACDPERLTAPAQTEDAAPRPSSAADVFLKLKENPEDLVLVAP
EAGDATEPLTGFVELSFASPPSPNTVPDHPQDLCTPELLQLLTPIFDPVLPPSPASSPVP
VLSPCREEEEEEEEMDTSQVEKFFAVWPEGGEQRGPTLDMDAMDLDMLAPYISMDDDFQL
TVLTSLPEDDARAPSSLETSATKAAAPGNRKRTHNPDDETQPTVQDKRQKQDRSTVEEEL
LLSHGLLDCLEETDQSDLILDLDPGPGRRSQLLTDRDPVLGGIQGLCDTAALMRGVFLPR
PPELSPLLLSMT
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggacacgaaagacgaggctgtggagatgaaacggagcagctccgagcagaggaagctg
cgctcgcgggacgcggcccggtgccggcgcgggcaggagacggaggtgttctacgagctg
gcgcgcaccctgccgctcccgcgcagagtctccacccacctggacaaagccgccatcatg
agagtcgccctcagcttcctgcgcatgcggcgcctcctgcgacccggtgaggagcacaaa
gaggaggccgacgtccaggaggaggaggaggaggaggaggaggaggatccaatggactgc
ttctacccccaggctcttgctggcttcatcgtggtgctgtcagaggagggagacgtgatc
tacctgaatgacagcgtcagcaaacacatcggcatcactcagctggagctgctgggtcag
agcatctatgacttcgttcatccctgcgaccaggaggagctccgggacctgctggctcca
cgtccaggcctcactaagaagtcgccgctgcagagcgagaggaacttcttcctgcgtgtg
aagagcacgctgaccagcagggggcgcaccgtcaacctcaagtctgccacatggaaggtt
ctccactgcactggacacatgcgtccgttcggggacggctccacgtcgccccctgcagcc
agagtgatgacgctgctgtgtgagccggtccctcacccgtccagcgtggagttccctctg
gactcgtgcaccttcctgacgcgccacagcatggacctgcgcttcacgcactgcgagggc
agggtgacggagctggtggggtacagtcctgacgatctgattggccgctcagcgtacgag
ttgtatcacgcactcgactccgaccacatgaagaaaagcctgcacacgctcctgtccaaa
ggtcaggtgagcaccagcctgttccgcttcctggcgaacggcggcggcttcgtgtgggcg
cagactcaggccaccgtcctctacggcagcaagacgtcgcagcctgaggccgtggtgtgt
ctcaacttcatcctcagtgcggtgcagcagccgggcgtggtcctctccgtggagcagacg
cgctgccgccctcagctgaaggcggagcctccgtcaccagcagctccagagggcgcgtgt
gaccctgaacgcctcactgcacccgctcagaccgaggacgcagctccgcgtcccagcagc
gctgcagacgtgttcctgaagctgaaggagaatccagaggatctggtgctggtggctccg
gaggccggagacgccacggaaccgctgacgggttttgttgagctgtcctttgccagtcct
cccagtccaaacacggtgccggaccacccacaggacctgtgcacccctgagctgcttcag
ctcctcactcccatcttcgacccggttctgccgccgtcaccggcttcctctccggtacca
gttctgagcccctgcagagaggaggaggaggaggaggaggagatggacaccagccaagtg
gagaagttctttgcagtttggccagaaggtggtgaacagagaggcccaacgctggacatg
gatgcgatggatctggacatgttggctccctacatctccatggacgacgacttccagctc
accgtcctcacttcgctgccggaggacgacgcacgcgcgccgtcctcgctggagacgtcc
gctacgaaagctgcggcgccgggaaacaggaaacggacccacaaccccgatgatgagacg
cagccgacggttcaggacaagaggcagaagcaggatcgttccacagtagaagaggaactt
ctgctgagccacgggctgctggactgtttggaggaaactgaccagtctgatctgatcctg
gacctggacccgggcccaggccgacgaagtcagctgctgacggacagagacccggtgtta
ggaggcatccagggtctgtgtgacactgcagctctgatgaggggcgtgttcctgcctcga
ccccctgagctgtcgccactgctgttgtccatgacttga
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