Betta splendens (Siamese fighting fish): 114867718
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Entry
114867718 CDS
T08231
Symbol
tsr1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114867718 (tsr1)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
114867718 (tsr1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
Motif
Other DBs
NCBI-GeneID:
114867718
NCBI-ProteinID:
XP_029026451
UniProt:
A0A6P7P2E9
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Position
13:complement(5160949..5168764)
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AA seq
835 aa
AA seq
DB search
MVKMAANEEKQQGHRPGIYKQKNKGHKHGKHRTKGEIERLNKGRVSVMALTKKQRKEQRK
MDRRHKANQLRKNKKAMVLTEKRRLGSRDGPPHLVAVVSLHAAADAGAVTKLLRGEDAGG
VVHQEQCISGVTDSFGLILPRFKQRFTFLSQNTADIHALLDVAKIADSIVFAVDSTEGWD
SYGEYCLSCLFAQGLPSHALVCQGVTDLPVKKRVDSRRALSKIIDARFPDARLFPLDTEQ
DATLLLRHLGTQRQRKLGYRSRRSHLLAQHVTFVPNGLAEGTGGGPTGLGTLCVSGYVRG
HSLRADRLVHISGHGDFQVIQIDAPPDPLPLNLTTHRSAKPGKDVDMTDGGENDNAPVRV
LMKSDPSTRESLQTEAEVDPMDGEQTWPTETELLEAEEARKNKRVMKVPKGTSDYQATWI
VDDDEDENGEMDEESSEDDDDGMLDDAMDGEDDENNSQALDSSCSSEAEEEEEEEEEEVC
SAERGGEEQRYDEHMDEAAEEEGLRLYREARANEMFPDEVDTPLNTPARIRFQRYRGLKS
FRSSPWDPMENLPLNYSRIFQFQSYERTRHRVLAEAAAEEEGAMVGWYVTLHMSDVPFSV
MESVQSGRPLVLVSLLPHEQKMSVMHLLVRRHPSNTEPIKSKEELVFHCGFRRFRASPIF
SQHTSADKHKMERFLRPDSPAVVSVYAPITFSPAGVLLFKHRDDGVQDLVATGSLLSCDP
QRVVLKRIVLSGHPFKINRRSAVVRYMFFNREDIMWFKPVELRTKWGRRGHIKEALGTHG
HMKCLFDNQLRSQDTVLMNLYKRVYPRWTYDPFVPRSLPWFKRESAVELDDSDME
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatggctgcgaacgaggaaaaacaacagggccacagacccggtatatacaaa
cagaagaataaaggacacaagcatggcaagcaccggacgaaaggtgaaattgagagactt
aacaaagggagagtgtctgtgatggcgctaaccaaaaaacagaggaaggagcaaaggaag
atggacagaaggcacaaagccaaccagttacgcaagaataagaaagccatggtcctgaca
gagaagcgacgtctaggatccagggatggtcctccacatttagttgctgtggtttcgctc
catgctgcagctgatgctggtgctgttaccaagctgctgcgcggagaggatgccgggggc
gtcgtacatcaggagcagtgcatcagtggcgtcactgacagttttggtctaatcctgcct
cgtttcaaacaaaggtttacatttctaagccagaacacagctgacatacacgccctgctg
gatgtggcaaaaattgcagatagcattgtatttgcagtggattccactgagggttgggac
agctatggagaatactgtctctcctgtctctttgcccaaggtcttcccagtcacgccttg
gtgtgtcagggcgtcactgatcttcctgtaaagaaaagggttgactccaggagagctctg
tcaaagatcatagatgcccgtttccctgatgcccgccttttccctctggatacggagcag
gatgccactctgcttctcagacacctgggtacgcagagacagagaaagcttggttaccgt
tctaggcgttcccatctattggcccagcacgtcacgtttgtgcccaacggtctcgctgag
gggacaggaggtggaccgactggcctaggcacactctgtgtctctgggtatgttcgaggc
cattctctaagggcagacagactggtgcacatcagtggacatggagactttcaagtcatt
cagattgatgctccaccagatcctcttcccctcaacttaacaacacacagatcagcaaag
cctggcaaagacgttgacatgacggatggaggggaaaatgacaatgctccggtgcgcgta
ctgatgaaatcagacccctcaaccagggagagcctgcagacagaggcagaggtggatccc
atggatggagaacagacttggccaactgaaacagagctgctggaagctgaagaggccaga
aagaataagcgtgtcatgaaggtcccaaaaggaacatcagattaccaagcgacgtggatt
gtggatgatgatgaagacgagaacggagagatggatgaagaaagtagcgaggatgatgac
gatggcatgctggacgatgccatggatggagaggatgatgagaataactctcaggctctt
gactcaagctgttcttcagaagcagaggaggaagaggaggaagaggaggaagaggtgtgc
tccgctgagcgaggtggagaagagcagcgttacgatgagcacatggatgaggctgcagaa
gaagaaggcctaagactctaccgtgaagctcgagccaatgagatgttcccagacgaggtg
gacacgcccctcaacacaccagctagaatcaggttccagcgctacagaggtttaaaaagt
ttccgctcctcaccctgggaccccatggagaacttacctctcaactactcgcgcatcttc
cagttccagagctacgagcgcacacgccaccgtgtgctggctgaggctgcagctgaggaa
gagggagccatggtgggctggtacgttacactgcacatgagtgacgtacctttttctgtg
atggagagcgtccagtcaggccgacctctggtgctggtgtccctcttgccccatgagcaa
aagatgtcagtgatgcacctcttagtgaggagacaccccagcaacacagagccgatcaaa
tccaaagaggaactcgtgttccactgtgggtttcgaaggttcagagcatctcccatcttc
tcccagcacacttcagctgacaagcataagatggagcgcttcctcaggccagattcccct
gctgtggtgtcagtgtatgcccccatcaccttctcccctgcaggagtcctgctcttcaaa
cacagggatgatggtgtccaggacctagtggccacaggcagtctgctcagttgtgaccct
cagcgcgttgtgctgaagaggattgtgctgagcggacacccgttcaagatcaaccgtcgc
tctgctgttgtccgttacatgttctttaacagagaagacatcatgtggttcaagccagtg
gagctgcgaacaaagtggggtcggagaggccacatcaaagaggctttaggaacacacggt
cacatgaagtgtctgtttgataatcagctgcgctcccaagacactgtgctgatgaatctg
tacaagagagtgtatcctcgctggacatacgacccttttgtgcctcgatctcttccctgg
ttcaagagggaaagtgctgtggaactggatgactcagacatggaatag
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