Betta splendens (Siamese fighting fish): 114867780
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Entry
114867780 CDS
T08231
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114867780 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114867780 (dhx36)
03012 Translation factors [BR:
bspl03012
]
114867780 (dhx36)
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114867780 (dhx36)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114867780 (dhx36)
Translation factors [BR:
bspl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114867780 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_14
AAA_19
NPHP3_N
DUF7428
Motif
Other DBs
NCBI-GeneID:
114867780
NCBI-ProteinID:
XP_029026610
UniProt:
A0A6P7P988
LinkDB
All DBs
Position
13:6832875..6850969
Genome browser
AA seq
1066 aa
AA seq
DB search
MSYGYGGGGGRRGRRGGRGNRDGSRERWDRGGGPGGHGSDFDQDRGGQRDRPPPHLKGRE
IGLWYARYGAVRRKQADRRSRAVVQMDEAREQHITRLLNSVQNDQSGPGREGRNARASTS
DSWQSAASGSGHCYFDGDLPEEEKLKIEIESENEEEDASLGQNKAAQQSRYFSSKAIKDE
PPDNWDVDEHEGEDKKENLRFKDRDAEFLFHKVVQDHSLDDYLKNDLQSKTSNPQYKEMM
KFREKLPSYSKKEELVELINSNRVLVVSGETGCGKTTQVTQFILDDFIYRDMGSMCRVVC
TQPRRISAISVAERVASERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRS
DPLLSSVTHLVLDEIHERNLQSDVLLVIVKDLLNTRDDLKVILMSATLNAEKFSRYFDNC
PMIHIPGLTFPVEEFLLEDIVEMTRYRPQNQDRRHSQRRGFWQGRHSRAEKDEKEAEYKE
SWPSYARTLQGRYSDNTIATLEMLDSDDKIDLDLIVELIRHIVLNDHEGAILVFLPGWDN
ISTLNDLLMAQQMFRSERFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITI
DDVVYVIDGGKIKETNFDTTNNISTMAAEWVSLANAKQRKGRAGRVCPGKCYHLYNGLRA
SLLESYQLPEIMRTPLEELCLQIKILKLGSIARFLEKALDPPTEKAVSLAIKNLMDLNAL
DHSENLTALGFHLARLPVEPHIGKLILFGALLGCLSPVLTIAASLSFKDPFFIPLGKEKM
ADMRRKMLSRNSKSDHLTIVNAFQGWEEAKQRGGRYERDYCWDNFLSANTLQMLQNMKGQ
FAEHLLHAGFVSSKDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSHSRKRPGVKVY
TQADGKVCIHPKSVNAEETEFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDISIQ
KDEDQDTIAVDKWIVFRSPARIAHLVKSLKKELDSLLEEKIRAPAPVDWQNRQSKDCAVI
TAIIDLITTQEKPTGGIKGHDRAWANDRRGQHIHFDDDDDDDDNDD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggatatggcggtggaggagggaggcgaggaagaagagggggtcgaggtaac
agggatggcagcagggaaagatgggacaggggaggaggtccagggggacacggctctgac
tttgaccaggaccgaggtggacaacgcgaccggcctcccccacacctgaagggccgcgag
attggtctgtggtacgcaagatacggagccgtgaggaggaaacaggcggaccggagatcg
cgagcagtggtccagatggatgaggccagagagcagcacataacaaggctgcttaactcg
gtccagaacgaccagtctggtccaggcagagagggcaggaacgcaagagcctctacgtct
gacagctggcagtcagctgccagtggaagtggtcactgttactttgatggggatctgcct
gaagaagaaaaattgaagattgagattgaatcagagaatgaggaggaagacgctagtctg
ggtcagaacaaagctgctcaacaatcacgatacttttcttcaaaagccattaaagatgaa
cctccagacaattgggatgttgatgagcatgagggggaagacaagaaagagaatcttcga
ttcaaagacagggatgctgagtttttgtttcacaaggtagtccaagatcattcactggat
gactacttaaagaatgatctgcagagcaagacatcaaacccacaatacaaagaaatgatg
aaattcagggaaaaactaccatcctactccaaaaaagaggagcttgtggaactgatcaac
tctaaccgtgtccttgttgtgagtggggaaacaggctgtggaaagaccactcaggttacc
caatttatcctagatgacttcatctacagagacatgggttcgatgtgccgggtagtctgc
acacagcctcgtcgcatcagtgccatttcggtagcagaacgggtagcatcagagcgagca
gaaagtgtagggaatgggaattcctgtggttaccaaatccgcctgcagagtcggttacca
cggagacaaggttcgatcctgtactgcacaacaggcattattcttcagtggcttcgttca
gaccctttgttgtcgagtgttacccacctggtgttggatgagatccatgagagaaacctc
cagtcagatgttttgctggtcattgtgaaggacttactcaacacccgggacgatctcaaa
gtcatccttatgagtgctaccctcaatgctgaaaagttttcgagatattttgacaactgt
ccaatgatccatattcctggtttgacgttcccagtggaagagttccttttggaggacatt
gtagagatgaccaggtatcgtcctcaaaatcaggaccgtcgacactcgcagaggagaggg
ttttggcagggtcgccactccagagctgaaaaggatgagaaagaagctgaatacaaggag
tcctggccttcctatgctcggactctccagggcagatactctgacaatacgattgcaaca
ctggagatgctggacagtgatgacaagatcgaccttgatctgattgtggaactgattcgg
cacattgtgctgaatgatcatgaaggagctattttggtgttcttgcctggctgggacaac
atcagcactttaaatgacctgctcatggcccagcagatgttccgatcagagcggttcgtt
atcatccccttgcattcccttatgcctactgttaatcagacgcaggtgttcaaaaggcct
cctcctggagttagaaagattgttattgctactaatatcgctgaaaccagcatcaccata
gatgacgtagtttatgtgatagatggggggaagataaaggagacaaactttgacaccacc
aacaacatcagcaccatggcagctgagtgggttagcctggccaatgccaaacagaggaaa
ggtcgtgctggcagagtgtgtccagggaagtgctatcatctgtacaatggtctcagggcc
agcctactggagtcctatcagttacctgaaattatgaggacaccactggaggagctctgc
ctgcaaatcaagatattgaagcttgggtctattgctcggttcctggagaaagctttggac
cctcctactgaaaaggctgtaagtctagccatcaagaacctcatggacctgaacgccctg
gaccattcggagaacctgacagctctgggtttccacttggcccgtctgcctgtagagcct
cacatcggcaaactcatcctgttcggagctctgctgggctgcctcagccccgtactcacc
atcgctgcttcactcagcttcaaagaccctttcttcatacccctgggtaaagaaaaaatg
gcagacatgaggagaaagatgctgtccagaaactccaagagtgaccacctcaccattgtc
aatgccttccagggatgggaggaagcaaaacagcgcggtggcaggtatgaaagggattac
tgctgggacaacttcctgtctgccaacacactccagatgctgcaaaacatgaaaggtcag
tttgctgaacatctgttgcatgcaggctttgtcagcagcaaggatcctaaagaccccaaa
tctaatgtcaactctgacaatgagaagttaatcaaagctgttattgtagccggtctgtac
cccaaggtggccatgatcagaccatctcacagcagaaagagaccgggggtcaaggtttac
acccaggccgatggcaaagtgtgcatccacccaaagtctgtcaacgccgaagagacagag
ttcaactacacgtggctcatctaccacctgaagatgaggacgagcagcatcttcttgtac
gattgcaccgaggtgtccccgttctcgctgctgttcttcggaggagacatctccatccaa
aaggatgaggaccaggacaccatcgcggtggacaagtggatcgtcttcaggtcgccggcg
cgcatcgctcacctcgtcaagagtttaaagaaggagttagactctttgttggaggagaag
atccgtgcgccggctcctgtggactggcaaaaccgtcagtccaaagactgtgcagtcatc
acagccatcatagacctcatcaccacacaggagaaacctacgggcggcatcaagggtcat
gaccgagcgtgggccaatgaccggagaggacaacacattcactttgatgatgatgatgat
gatgatgacaacgatgactag
DBGET
integrated database retrieval system
