Betta splendens (Siamese fighting fish): 114867843
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Entry
114867843 CDS
T08231
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114867843 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
114867843 (lrfn1)
Cell adhesion molecules [BR:
bspl04515
]
Immunoglobulin superfamily
SALM family
114867843 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
bspl04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
114867843 (lrfn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_1
Ig_2
fn3
LRR_5
ig
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
Sp38
Motif
Other DBs
NCBI-GeneID:
114867843
NCBI-ProteinID:
XP_029026747
UniProt:
A0A6P7P2Z7
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All DBs
Position
13:5261438..5345818
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AA seq
758 aa
AA seq
DB search
MDRVVLCVLLCAALVRGYSCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITVIRRKDFFNMTSLVHLTLSRNTISQITPHAFLGLRSLRALHMDGNRLSVIKSDHFK
GLINLRHLILGNNQIHLVAPNSFDEFVSTIEDLDLSNNNLRGLPWEAIARMTNINTLTLD
HNLIDHIEAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLMDKYFWSIQEEEFICEPPLITKHVVTKPFV
MEGQGVTLKCKAVGDPDPEIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGAFNCV
ASNAAGIATAAVEISMIPLPLFVNNTGHMREDPGLSDITTSSKSGNDTKGYDKQDRRVMV
TELTSSSAVLRWPSERHIPGIRMYQIQYNSTADDTLVYRMIPSTSKNFLINDLAAGREYD
LCVLAVYDDGITALTATRVVGCVRFHTASEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYSGPGDAKTKASASMHSQTNGSQQRLQRSASKQPSDEGPREAPGPKECT
ALVLRVETEKKDDSAAATAALEVELPPASTDKRKRRSSLDAQRSGALSEDTQTDSSLTGS
TMSLCLIGPNAGTKEAPRLKDKKSALANMGLLPNELARTRHRFSFDGGDYSIFQSHSYPR
RARTRWHKSTNQLNTEASPLASRRVTFSSTEWMLESTV
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggaccgggtggttctgtgcgtgctgctgtgcgcggcgctggtgaggggctacagctgc
cccggccgctgcatctgccagcacctctccccgacgctgacgctgctctgcgccaagacc
ggcctgctgttcgtgccgcccaccatcgaccgcaagaccgtggagctccggctcaccgac
aacttcatcaccgtcatccgcaggaaggacttcttcaacatgaccagcctggtccacctc
accttgtcccggaacaccatcagccagatcaccccccacgccttcctgggcctgcggtcg
ctgcgggcgctgcacatggacgggaaccgcctcagcgtcataaagagcgaccactttaaa
ggcctgataaacctgcggcacctcatcctcgggaacaaccagatccacctggtggccccc
aactccttcgacgagttcgtctccactatcgaggacctggacctgtccaacaacaacctg
cgcggcctgccgtgggaagccatagccagaatgaccaacatcaacacgctcacgctggac
cacaacctgatcgaccacatcgaggcggggaccttcacgctgctcaccaagctggtccgc
ttggacatgacctccaacaggctgcagaagctgccgccggacagcctgttccagcacgcg
caggtgctgtccgacgccaagggctccagctcctccacgctggccgtgagcttcggcggg
aacccgctccactgcaactgcgagctgctgtggctccggaggctcacgagggaggacgac
ctggagacctgcgcctccccggagcacctcatggacaagtacttctggtccatccaggag
gaggagttcatctgcgagcctcctctcatcaccaaacacgttgtcaccaagccctttgtg
atggaggggcaaggggtcactctcaaatgcaaagccgtgggggatccggacccagagatc
cactggcggtcacccgacggcaagctggtgcacaacaactcccgcaccatcctgtacgac
aacggcaccctggacatcctcatcaccacgctgaaggacagcggcgccttcaactgcgtg
gcgtccaacgccgcgggcatcgccacggcggccgtggagatcagcatgatccccctgccg
ctgtttgtgaacaacacgggccacatgcgtgaggacccgggcctctccgacatcaccacc
tcctccaaatccggcaacgacaccaagggctacgacaagcaggacaggagggtgatggtc
acggagctgacctcctcgtccgccgtgctccgctggccgtcggagcgccacatccccggc
atcaggatgtaccagatccagtacaacagcacggcggatgacacgctggtgtacagaatg
atcccatcgaccagcaagaacttcctaatcaacgacctggccgcggggcgggagtacgac
ctctgcgtgctggcggtctacgacgacggcatcacggcgctgacggccacgcgcgtggtc
ggctgcgtgcgcttccacacggccagcgaggtcagccagtgtcgcttcatgcacagccag
ttcctggggggcaccatgatcatcatcatcggcggcatcatcgtcgcctcggtgctggtc
ttcatcatcatcctgatgatccgctacaaggcctacagcggcccgggcgacgccaagacc
aaggccagcgccagcatgcactcccagaccaacggcagccagcagcggctccagcgctcc
gcctccaagcagccgtccgacgagggcccgcgcgaggccccggggcccaaggagtgcacg
gcgctggtgctgagggtggagacggagaagaaggacgactcggcggccgccaccgccgcc
ctggaggtggagctgccgccggcctctacagacaagaggaaaagaagaagcagcctggac
gctcagcgctcgggcgccctgtctgaggacacgcagacggacagtagcctgacgggctcc
accatgtccctgtgtctcataggcccgaacgctggcaccaaggaggctcccagactcaag
gacaagaaaagcgccctggccaacatgggcctgctccctaacgagctggcacgaactagg
cacaggttctccttcgacgggggcgattactccatattccagagtcacagttacccgcgc
agggcgaggacgaggtggcacaagtccaccaaccagctcaacaccgaggcgtcgccgctc
gccagccggagggtcacgttcagcagcaccgagtggatgctggagagcaccgtgtga
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