Betta splendens (Siamese fighting fish): 114867906
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Entry
114867906 CDS
T08231
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04142
Lysosome
bspl04144
Endocytosis
bspl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114867906
04142 Lysosome
114867906
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114867906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114867906
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bspl04147
]
114867906
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114867906
Exosome [BR:
bspl04147
]
Exosomal proteins
Proteins found in most exosomes
114867906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
114867906
NCBI-ProteinID:
XP_029026871
UniProt:
A0A6P7P3J6
LinkDB
All DBs
Position
13:complement(12757351..12776343)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSTLTMESDKFICIREKVGEQAQVVIIDLADPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEPTAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPMEGPLQTRLLEMNLVHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKNPELWASVL
LETNNYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPPVWSQLAKAQLQKGMVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDDKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPADAWKEGQFKDIVTKVANVELYYKAVHFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYAALRTSIDAYDNFDNISLAQGLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLAWFLKE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
EASESLRKQEEQATESQPIVYGTPQLMLTAGPNVAVPPQQAYGYGYTAAPGYAQPPQPSF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctacctattcgcttccaggagcatctgcagctccagaacctgggagtc
aacccagcaaacattggattcagcactctgaccatggagtcggacaagttcatctgcatc
agggagaaagttggtgagcaggcccaggttgtcatcatagatttggccgacccaaacaat
cccattcggaggcctatctctgcggacagtgccatcatgaaccctgcgagcaaagttatt
gctcttaaagcggcaaagaccttgcagattttcaacattgagatgaagagcaagatgaag
gctcacacgatgacagatgatgtgaccttctggaagtggatatccctcaacactgttgcc
ctggtcacagacaacgcagtctaccattggagcatggagggtgactcacagccaatcaaa
gtctttgaccgtcactccagtcttgctggctgccagatcatcaactaccgcacagatgct
aaacagaagtggttgctgctcattggtatttcagcacagcaaaatcgtgttgttggagcc
atgcagctgtattcagtggacaggaaggtgtctcagcccattgaagggcacgccgctggt
tttgcacagttcaagatggagggaaacacagaggagtcgactctgttctgctttgctgta
cgaggacaagcagggggcaaactgcacattattgaagtggggactccaccgacggggaac
cagccgtttccaaaaaaggcagtggatgttttctttcctccagaagctcagaatgacttt
cctgttgcaatgcagattagttccaagcaggatgtggtctttctcatcactaaatatggc
tacattcacctttacgacctggagactggaacttgtatctacatgaacaggatcagtggg
gagaccatttttgtcaccgctccccatgagcctacagctggtatcattggcgtcaacagg
aagggacaggtcctatcagtgtgtgttgaggaggaaaacataataccctacatcactaac
gtgctccagaaccctgacctggctcttcgcatggctgttcgcaataatcttgctggtgct
gaggagctgtttgcccgcaagttcaacaccctctttgcagcaggaaattattccgaagct
gccaaggtggcagccaatgcaccaaagggtattctgcggaccccagacaccatacgccgc
ttccagagtgttccagcccagccaggccagacgtctcctttgctccagtattttggcatc
ttacttgatcaaggccagcttaacaagtttgaatcgctggagctttgcagacctgtccta
cagcagggccgcaagcagctattggagaaatggctaaaggaggacaagctggagtgctct
gaggagcttggagacttggtgaagtctgtagatcctactcttgctcttagtgtctacctc
agagccaatgtccccaacaaagtcattcagtgctttgcagagactggccagtttcagaag
attgtcctttatgccaagaaggttggctacactccagactggatcttcttgctgaggaac
gtaatgcgtattagtccagagcagggacttcagttctcccagatgttggtccaggatgaa
gagccacttgctgatattacacagatagttgatgtcttcatggagtacaacctgattcag
cagtgtacatccttcttactagatgccctaaagaataacagacctatggaaggtccactg
cagacacgcctgctggaaatgaatttggtccatgcaccacaggttgcagatgccatcctg
ggtaatcagatgttcacccactatgatcgtgctcatgttgcacagctgtgtgagaaggca
ggtcttctgcaaagggcgctggagcattatacagacttgtatgacatcaaacgggctgtg
gtgcatacacatcttctcaacccagagtggttagtgaatttctttggctctttgtcagtg
gaagactctctggagtgtttaagggcaatgctctctgcaaacatccgccagaatctgcag
atctgtgtgcaggtggcatctaagtaccatgagcagctcactactcagtctctgactgag
ctttttgagtcattcaagagttttgaaggtttgttctatttcctgggttccattgtaaac
ttcagccaggatccagaggtccactttaaatatattcaagctgcctgcaagacgggacag
atcaaagaggtggaaagaatttgcagagagagtaactgctatgaccctgaacgagtgaag
aacttccttaaggaagcaaagctgactgaccagcttcctttgatcattgtgtgtgaccgc
ttcgattttgtgcacgatttggtgctgtacctgtaccgcaacagtctgcagaaatacatt
gagatctacgtgcaaaaggtgaatccaagccgtctgccagtagtgattggagggttactg
gatgtagactgtgctgaagatgtgattaagaacctgatcatggttgtgagaggccaattc
tccacagatgaactggttgcggaagttgagaaaaggaatcgtctgaagctgctgttgcct
tggttggaggctcgtattcatgaaggttgtgaggagccagcaacccataatgccctagcc
aagatctatatcgacagcaacaacaaccctgagcgcttcttgagagagaatccatattat
gacagccgtgtggtgggcaagtattgtgagaagagagatccccatcttgcctgtgtggcc
tatgaaagaggacaatgtgaccaggaactgatacatgtgtgcaatgaaaactcgctgttc
aagagtctgtcccgctaccttgtacggcgcaagaaccccgagctgtgggcgagcgtgctg
ttggagactaacaactacagaagaccactcattgatcaggttgtccagacagccttgtca
gagacccaggatccagaggaggtttctgttaccgtgaaggccttcatgactgccgacctt
ccgaatgaactcattgagcttctcgagaaaattgttctggataactctgtttttagtgag
cacagaaaccttcagaacctgctcatcctaaccgccatcaaagctgatcgtacacgtgta
atggagtacatcaaccgtctggataactacgatgccccagacattgcaaacattgccatc
agcaatgagctgtttgaagaggcctttgctatttttaggaaatttgatgtcaacacttct
gctgtacaggttttaattgagcacattggtaacctggacagagcttatgagtttgctgag
cgctgcaatgagccaccagtatggagccagttggcaaaggcccagcttcaaaagggaatg
gtcaaagaagctattgattcctacatcaaggccgatgacccctctgcttatatggaagtg
ggacaggctgcagctcaaagcggaaattgggaggacctggtgaaatttctgcaaatggcc
cgaaagaaggcccgtgagtcctatgttgaaacggagttgattttcgctttggccaagact
aatcgtctagcagagctggaagagttcatcaatggtcctaacaatgctcacattcagcaa
gtgggtgatcgatgctatgacgacaaaatgtatgaagcagctaaactgctttacaacaac
gtgtccaactttggtcgtctggcctccactctggtgcacctaggagagtaccaggcagct
gtggacggagcacggaaggcaaacagtacccgcacatggaaggaggtctgtttcgcctgt
gtagatgggaaggagtttcgtcttgcccaaatgtgcggcctgcacattgttgtccacgct
gatgaacttgaagagctcatcaactactaccaggaccgtggatactttgaggagctgatc
accatgctggaggctgctctcgggttggagcgtgctcacatgggaatgttcactgagctg
gccatcctctactcaaagtttaagcctcagaagatgagggagcacctggagctcttctgg
tcacgtgtcaatattccaaaggttctcagagcagcagagcaggcccacctttggggagag
ctggttttcctctatgataagtatgaagagtatgataatgccatcatcaccatgatgaac
catccagctgatgcctggaaagaaggccagttcaaagacattgttaccaaggtggccaat
gtggagctgtactacaaggccgtgcacttttacctagaattcaaaccattattactgaat
gacctgctcatcgtcctgtctccaaggctggatcacacacgtgctgtcaacttcttcagc
aaggtgaaacaactgccactagttaaaccttatctaaggtctgtccaaaatcacaacaac
aagtcggtgaatgaggcacttaacaacctgttcattattgaggaagactatgcggcattg
cgtacgtctattgacgcctatgacaacttcgacaacatctcactggcccagggcttagag
aagcatgagctcattgagtttaggaggattgcagcttacctctttaaaggcaacaatcgc
tggaagcagagtgtggagctctgcaagaaggacaaactctacaaggatgcaatgcagtac
gcctctgagtcaaaagacactgagctggcagaggagcttctggcttggtttctgaaggaa
gacaagaaggagtgcttcgctgcctgcctgttcacctgctatgacctgctgcggcccgat
gtggtgctggagacggcctggcgacacaacatcatggacttctctatgccatacttcatc
caagtcatgagggagtatctcagtaaggttgatgcgataaaggaaaaggtggacaaactc
gaagcctccgagtctctgaggaagcaggaggagcaggctacagaatctcaacccattgtt
tacggcacaccccagctcatgctcacagcaggacccaatgtggctgtgcctccccagcag
gcctatggttacggctacacagcagcgccaggctacgcccagccgccacagccctccttc
ggttatggcatgtga
DBGET
integrated database retrieval system
