Betta splendens (Siamese fighting fish): 114867971
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Entry
114867971 CDS
T08231
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04270
Vascular smooth muscle contraction
bspl04625
C-type lectin receptor signaling pathway
bspl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
114867971 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
114867971 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
114867971 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114867971 (arhgef12a)
Membrane trafficking [BR:
bspl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
114867971 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
114867971
NCBI-ProteinID:
XP_029027020
UniProt:
A0A6P7PAE7
LinkDB
All DBs
Position
13:8897002..8925298
Genome browser
AA seq
1438 aa
AA seq
DB search
MSDTQSSFTDRFPKKAIRTSSILSKDHPPDKKPKSDKPALPSNEFDPTEALVVQKSGSSS
VLAEGKTESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIK
VNGTLVTHSNHIEVVKLIKSGSYVALTVLGRPPGLAQIPLSEAESEMLGVSISSPNSPAT
ERPYSPQDRLSCTQSTWDENNSVGNQKVDILQRMLSKEQQELQAMKEEYSRNPSPKLLKD
IQEAKKHIPQLQGQLFKAAGTAQEAVPGGDADDGSIFETEPIYASKGDNTDPTWSSTPIS
RGFGPGSPESLCYPSPKSTPRNSFNSCHSPDAEDATDLDSLSPTTVNSPSSRHVSHIIGA
EDGYFDLDQEQSNGQCNSFNSIELLKSRPAHLAAFLHHVISQFDPAPVLCYLYADFYKQT
NSKETRRVFMDLHSFFIDRGAHLKVAVPESISSDLDRRRTELIPEEINRQHVQTLQDSLL
CDIQKNLEDFRQKRSMGLTVAEVELARLDQERIQDRVTLERERSYAENIITKIEDVLLTT
QTTEEEKCTTMQYVIYTYMKHLGVRVKEPRSLESKRVRINFLPKIKKSIKTDKEGEEKVK
KTRFPSILGPQRRPSRIEAGPVGKALDGRPRPQKQLSQPSLGASEQNEPGRLRGSQSSEG
SELTHSMSVNSSSPNSATFSSDTSRDADMGGTPNVGPSRLSDGLQADPLDGLPYPASQFD
FYNLDQVQEEDRESDRPHDGTPKAMRKLEGLGASDIPSEDDQRTDSEQDPPNWQQLVGQE
VLASLRPHEIKRQEVINELFYTERAHVRMLRVLDHVFYQKLSKEAILPPADIKNIFTNLE
EILQLHVSILEQMTAVRKRNESSVIDQIGDDLLCWFSIGEEKIKQAVGTFCSNQPFALEI
IKTKQKKDSRFTSFIQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLDNIAKYTDNLVEK
DKVKRAADCCRKILNHVNQAVKESEDKQRLEDYQRRLDLSSLKQTDNPLILELKNLDLTK
RTLVHEGTLSWKVNRDKTIELYTLLLEDILVLLQKQDERLILKCHSKNLTGAPDTKHFYS
PIIRLNTVLVRSVATDNKSFFVLSMSDGAQIYELMAPTVSDQRTWQRLITQRADAMKVKP
HTIIPLPQSDGERDGVEIITAGVSRLSRDPDRTSTGSTQSTDKESSPGSRSAMQSSLPGN
TPFEGVKAEEEEEEEGFVDPELPYQVADDGREGDSFDMFPSRADEALKTLAALKQVLVTQ
LMSQEAAEQTKRSTGARLLRTTSLRTPVDSRARVMVHNGSEKNSSQTRDVTQDMGSGDTG
FFDSPEDYAGYLVLEGYGGPGESSTDDDILASTTGKQLRTSQGCAADSGINLRFSSASQA
GSLSSFSRQVLSHLRNLQANLNYLKEVEAKYNNLIRQRPERSAADTDGNKGSSIHDKR
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccagcttcactgacaggtttcccaagaaagcaatcagaaccagc
agcatactcagtaaagaccaccccccagacaagaaacccaaaagtgacaaacctgcactt
ccctccaatgagttcgaccctacagaagctctggtggtgcagaagagtggcagcagcagt
gtgctagcagaggggaagactgagtcctgtggtctggtccagcgatgtgtaatcatccag
aaagatgaaaatggctttgggcttactgtcagcggtgacaaccctgtgttcgtgcagctt
gtcaaagaagatggggctgctatgcgtgcaggtgtacagacaggagacaggatcatcaag
gttaacgggaccctcgttacacattctaatcacattgaggtggtgaagctaataaaatct
ggatcctatgtggccctcacagtcttggggcgccctccagggctcgcccagatcccttta
tctgaggcagagtctgaaatgctgggtgttagcatctcctctccaaactccccggcaacc
gaacgcccctacagtcctcaggaccgcctctcctgcacgcagtcaacatgggatgagaac
aacagtgtcggcaaccagaaggttgacatcttgcaaaggatgctctcaaaagagcagcag
gagctgcaggccatgaaggaggagtacagccggaacccctccccaaaactactgaaagac
atccaggaagctaaaaaacacattcctcagctgcagggtcagctcttcaaggccgccggg
acagcacaggaggctgttccaggtggggatgcagatgatggtagcatttttgagacagag
cccatttatgcctctaagggagacaacacagacccgacttggagcagcacccctatatct
cgtggatttggacctggatcacctgagagcttgtgttaccccagcccaaagagcacaccc
cggaacagcttcaactcctgccactctccagatgcagaggatgccactgacctggattct
ctgtcccctactacagtcaacagtccttcatctcgccacgtctcgcatatcattggagct
gaggacggctattttgatttggaccaggaacagtcaaatggccagtgtaacagctttaat
agcatagagctgctcaagtcccgccccgctcacctagctgccttccttcaccatgtcatc
tctcagtttgaccctgcccctgtgctgtgctacctctatgccgacttctataagcagacc
aactccaaagagactagacgagtgttcatggaccttcactccttcttcattgaccgggga
gcacatttaaaagttgctgttcctgaatccatatcatctgatcttgaccggaggcggact
gaactgattccagaggaaataaacaggcaacatgtacagaccctgcaggactctttgctc
tgtgacattcagaagaacctggaggattttaggcagaagcgcagcatgggcctaacagtg
gctgaagtggaactagccagactggatcaggagagaattcaagaccgtgtcactctagag
cgagaacgctcttacgctgagaatatcatcaccaagatagaggatgtcctgttaactaca
cagaccacagaagaagagaaatgcactacaatgcagtacgttatctatacgtacatgaag
catcttggcgtgagggtcaaggaaccccgcagtctcgagtccaaacgagtacggatcaac
tttctccccaagatcaagaaaagcatcaagacagataaggaaggagaagagaaggtgaaa
aaaaccagatttcccagtattcttggtcctcagcgtcgccccagtcgcattgaagctggc
ccagtgggtaaagccctggatggccgaccacggcctcagaagcagctgtctcagccttca
ctgggggcgagtgagcaaaacgaacctggtcgtctgagaggcagtcagtcgagcgagggc
tcggaactaacgcactccatgtctgtgaacagctcatcaccaaacagcgccacctttagc
tctgacacgagtcgggatgctgatatgggtggaacccctaacgtcggcccctccaggctc
agcgacggccttcaggccgaccctctggatggtttgccataccctgcgtcgcaatttgac
ttttataacctggaccaggtacaagaggaggacagagaaagcgacagaccacatgatgga
acaccaaaggcgatgagaaaacttgaaggtctgggtgcttctgatatcccaagtgaagat
gaccagagaacagactcagagcaagatcccccaaattggcagcaactggtgggacaagag
gtcttagccagtctcagaccgcatgagatcaagagacaggaagtcattaatgagctgttt
tacacagagcgtgcacatgtgcggatgctcagagttttggaccacgttttctaccagaag
ctctccaaagaggccatcctgcctcctgctgatatcaagaacatcttcaccaacctggag
gagattttacagctgcacgtttcaatactggagcaaatgacagccgttcggaagagaaac
gagtcctcagtaattgatcagataggggatgacttgctctgctggttcagcatcggggag
gagaagatcaaacaggcagtggggacgttctgcagtaaccagcctttcgctctggaaatc
atcaagaccaagcagaagaaagactcaaggtttacgtcattcatccaggaagcagagagc
aaccgtctgtgtcgccggctgcagcttaaggacatcattcctgtggagatgcagcgtctg
accaagtaccccctgctactagacaacatcgccaagtacacagacaacctagtggagaag
gacaaagtgaaacgggcagcagactgctgtaggaagatactcaatcatgtcaaccaggct
gtgaaggaatctgaagacaagcagaggctggaagactatcagaggagactggacctttcc
tctctgaagcagacagacaaccctttaatcctggagctaaagaacctggatctgaccaag
agaacattggtccatgagggaacactgtcatggaaagtgaacagagacaagactattgag
ttgtatacactcctcctggaagacatcctggttctgctgcagaagcaagacgagcgtctc
atcctgaagtgtcacagcaaaaacctgacaggcgctccagataccaaacacttctacagc
cccatcatcagactcaacactgtgctggtgcgctctgtggccacagacaacaagtccttc
ttcgtcctttcaatgtccgacggagcccagatttatgaattgatggcgcccacggtctca
gatcagagaacgtggcagcgtctaatcacgcaaagagctgacgccatgaaagtcaaacct
cacaccatcataccattacctcagagcgacggggagagagacggtgtggagatcattaca
gcaggtgtttccagactcagcagagatccagaccgtacatccacaggcagcacccagtcc
acagataaagagagcagtccaggctccagaagtgcaatgcaaagctccttacctggtaat
actccgtttgaaggagtaaaggcagaggaggaggaggaggaggaaggctttgtggaccca
gagcttccgtaccaagtggctgacgacggcagagagggggactcgtttgacatgtttccc
tccagagcagacgaagcactgaaaaccttggcagcattaaagcaagtgttggtgacccag
ctgatgtcccaggaggctgcagagcaaaccaaacgctccacgggggcccgtctcctcagg
accacgtccctgcggacccccgtggacagtcgcgcgcgggttatggtgcacaacggctcg
gagaagaatagctctcagacacgggacgtaactcaggacatgggctctggggacacgggc
ttctttgactctcctgaagactatgcaggatatttagtcctggagggttacggtggcccg
ggggagagcagcacagacgatgacatcctggcatcaaccacggggaagcagctgaggacc
tcgcagggctgcgctgcagactctggcatcaacttgaggttttcatcagcgtcacaggct
ggcagcctctcttctttcagcagacaggttctgtctcatcttcggaaccttcaggccaac
ctcaactatctgaaggaggttgaggccaagtacaataatctaatacgccaaaggccagag
aggtcggcagcagacacagatggaaataaaggtagctcaattcatgataagagatag
DBGET
integrated database retrieval system
