Betta splendens (Siamese fighting fish): 114868096
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Entry
114868096 CDS
T08231
Symbol
dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114868096 (dhx34)
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114868096 (dhx34)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114868096 (dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
AAA_23
AAA_16
ResIII
Motif
Other DBs
NCBI-GeneID:
114868096
NCBI-ProteinID:
XP_029027295
UniProt:
A0A6P7PB81
LinkDB
All DBs
Position
13:18997052..19002974
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AA seq
1150 aa
AA seq
DB search
MDAERRRESRSWDWDSPQCRAQLDEIFFRQHDYIQAGSSEHKEFWAFFERFQRFKTKRDM
SVSKGGSSKEDRDGKDRRKTGHVDLGLPKEYDARYRINVSVCTRDVEERVGKTEHRSKHR
SSGPGSQEISDFRLTLLHFLDFNQRQSFGKLAKLRREQKNLPIFHYRDRIVELVRSHPVV
VVAGDTGCGKSTQVPQYLLSAGFNNVACTQPRRIACISLAKRVSFESLNQYGSKVGYQIR
FETTRTTATKLLFLTEGLLLRQIQQDKTLAQYEVVIVDEVHERHLHCDFLLGVLRSLLSD
RPDLRLILMSATINIKLFSDYFNSAPVLQVPGRLFPIQVIYQPIPPEEQPSRSEKLDPRP
YLRILQGIDQRYPPEERGDLLLFLSGVAEISSIQEACQVYATHTRRWIVLPLHSTLSLAQ
QDKVFDIAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWIS
RASSEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIHRVALDSLILQMKSMSLGDPL
SFVFIDPPPAASIQTAVTYLKEQGALDNHCELTSIGSLLAQLPVDVVIGKMLVLGSLFNL
VEPVLTVAAALSVQSPFLRSSQQNPDCATARQPLHSNQGDPFSLLNTFNAWVEVKGERGG
GSRKWCRRRGLEEQRLYEMVNLRRQFKDLLRSHELLESEDCTSSSGDRGQRRERITERRK
LHQMKRDHEQQEGTKRKVLKLEEGQDGEFSSGSDTEEAGRRKKSKESSGQDVDIQEVKFK
LRHNVTELQEAVGVSQDLSSRQQALLKLLLCRGLYPQLALPDEHNSTRKDSDQVFHTKNK
HGVVVHPTSVFASDPEVLQVPEDNASEMGSDKKDSSKHQLLAFVTLLETNKPYLSNCVRV
PALQALLLVANSVDSNADCTRLVIDGWLEVELREAEEALKVLSSALTLRAEWERMLQAKL
GQNKMEDSAVSGVTRKMVEKLSDGLVRFLLYTEITYSLRRLAALQVQNLYIGPRSESELC
HMKALDLNPLFPGAEAKPDPIKGGLRVTSFFTYNCLADSKDLYSECLRTFWSCPNCDLYM
PLTPLERMQHEATCRPAGEQQQLEEEAEKGKTGSVSSLTRVYHCDVCNEDLKLTSTEILK
HKRQHMYSAK
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaaaggcggagagaaagtcgaagctgggactgggacagtccgcagtgccga
gcccagctggacgaaatctttttccgccagcatgattacatccaggcaggcagctcggag
cataaagagttctgggccttctttgagcgcttccaacggtttaaaacaaagcgggacatg
tctgtgtcgaaaggaggcagcagcaaagaggacagagacgggaaggacaggaggaaaact
ggacatgttgacctcggcctccctaaagagtacgacgctcgctaccggatcaatgtgtct
gtgtgcactagggatgtcgaggagcgtgtgggaaagaccgagcacagaagcaagcataga
tcctctgggcctggcagtcaggagatctccgacttccgccttaccctcctgcatttccta
gacttcaaccagagacagagttttggaaaactggcaaagctgcgccgagagcagaaaaac
ctgcccatcttccattaccgggacagaatagtggaactggttcgaagtcaccctgtggtt
gtggtggcgggggacacggggtgcggcaaatccacccaagtacctcagtatcttctttca
gctggcttcaacaacgtagcctgcactcagcctcgacgtattgcctgtatatctctcgca
aagagggtcagctttgagagtctcaatcagtatggctcaaaggtgggataccagattcgc
tttgagacaacccgaaccacagccaccaaactgctgttcttgacagaggggctgctgctt
cgacagatccagcaggacaagacactggctcagtacgaggtggtgattgtggacgaggtc
catgaaagacatctccactgtgacttccttctcggggtgctgcgctcactgctctctgac
cgcccagatctgcgtctcatccttatgtcagccaccatcaacatcaaacttttctctgac
tattttaatagtgcgccggtgctgcaagtaccaggaaggttatttcctatacaggtgata
taccagccgattccacctgaggagcaaccctcacgttcagagaaactggatcccagaccg
tatctgcgcatcctgcaaggaattgatcagcgttatcccccagaggagcgtggtgacctg
cttcttttcctcagtggtgtggcagagatctccagcatccaggaggcttgtcaggtttac
gccacgcacacacgccgctggatagttctgccgctgcacagcaccctctcactggcccag
caggataaggtttttgacattgctcctcctggagtgaggaagtgcatcatctctaccaat
attgctgagacttcagttactatagatggggtgcgatttgttgttgactcagggaaagta
aaggaaatgagttttgatccaaaggctaagatgcagcgtctacaggagttctggatcagt
cgagccagttctgagcagaggaagggtagagctggtcgtacaggtccaggggtgtgttac
cgcctgtacgctgagtctgattacgacgctttcgcaccttatcctgtgcctgaaatccac
agagtggccctcgattctctaattcttcagatgaagagcatgagtcttggggatccgctt
tcttttgtgttcattgatccacctccagctgctagtatccagactgcagttacttatctg
aaagagcagggagctcttgacaatcattgtgaactgacctctattggaagtttattggct
caactgcctgttgatgtggtcatagggaagatgctggtgcttggctcattgtttaacctg
gtggagcctgtgttgaccgttgcagcagctctcagtgttcagtcacctttcctgcgcagt
tcacaacaaaacccagactgtgccactgctcgccagcctcttcacagcaaccagggagac
cccttctccctcctcaacaccttcaatgcctgggtggaggttaaaggagaaagaggtggt
ggttcaaggaaatggtgcaggcggagaggcttagaggagcagcgactgtatgagatggtc
aacctacgcagacagtttaaggacttgctgagaagccatgaattgctggagtcagaggac
tgcacttcctccagtggtgaccgtggacagcgtagggagaggataacagagaggaggaag
ctgcaccagatgaagagagatcatgagcaacaggagggcaccaaacgtaaggtcttgaag
ctggaggagggccaggacggagagttctcatcaggatcagacacagaggaagctggcaga
cgcaaaaaaagcaaggaaagctcaggacaggacgtagacatacaggaggtgaagttcaag
ttgcgtcacaacgtgaccgagctgcaggaggctgtgggcgtcagtcaggacctgtcctcc
cgtcagcaggcgttgcttaagctgctgctttgcagaggcctctaccctcagctggcactg
cctgacgaacacaactccacccgcaaggactctgaccaggtttttcacacaaagaataag
catggagttgtggtccatcccaccagtgtgtttgccagcgatccagaggtgttacaggtt
cctgaggataacgccagtgaaatgggctctgataagaaggacagcagtaaacaccagctg
ctggcctttgtcactctgttggagaccaacaagccctatttgtccaactgtgtacgagtt
ccagcgttgcaggctctgctgctagtggcaaactctgtggacagtaacgctgactgcacg
cgcctggtgatcgacggctggctggaagtggagctcagggaagcggaggaggcgcttaag
gtgctgtcctcagctctgaccctcagggcagagtgggagcgcatgctacaggccaagctg
ggacagaacaaaatggaggactctgcagtctctggggtgacccgcaaaatggtggagaag
ttaagtgatggcctcgtgcgcttcctgctgtacactgagataacttacagcctgcggcgg
ctcgcagctctccaggtgcagaacttatacattggccctcgatcagagtctgagctgtgt
cacatgaaagctctggatctaaacccgctgtttccaggagccgaggccaagccggacccc
attaaaggaggcctgcgtgtcaccagcttcttcacatacaactgtttggctgactcgaag
gacctctacagtgagtgtttgcgcactttctggagctgtcctaactgtgacctctacatg
ccactgactcctctggagcgcatgcagcacgaggccacctgcaggccagcaggagaacag
cagcagctggaggaagaggcagaaaagggaaagacaggttctgtgtcaagtcttactaga
gtttatcactgtgacgtctgtaatgaagatctgaagctcacttcaacagagattctcaaa
cataaaaggcagcacatgtattctgcaaagtga
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