Betta splendens (Siamese fighting fish): 114868376
Help
Entry
114868376 CDS
T08231
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03440
Homologous recombination
bspl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114868376 (brip1)
03460 Fanconi anemia pathway
114868376 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114868376 (brip1)
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114868376 (brip1)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
114868376 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
114868376 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-GeneID:
114868376
NCBI-ProteinID:
XP_029027720
UniProt:
A0A6P7PBS3
LinkDB
All DBs
Position
13:complement(2740237..2801211)
Genome browser
AA seq
1230 aa
AA seq
DB search
MAGVEYTIGGVKIHFPCKAYPSQLAMMNAIIRGLNSECHCLLESPTGSGKSLALLCSALG
WQQAQCAKLKEAGNTGPDMNHSDEKSGDDITPCQSRSQLQHQLKPPVSSCMDANQQLGSA
AESMSQQEEPQTKILSPASRLTEKFRSSPTSDCEKDNDFLPERKRMRTPDHKAVGWNPLL
AVDEEYSSSVSRKRQRVERGVIFIDDDPELDSKSSDSQNQSTQATSPAAVLSPSCNIPET
CPNWLCDSDNVKVKGKDGTKGIPKIFFGTRTHKQITQIAHELQRTAYSSVPMTILSSRDH
TCVNPMVAPHSSRNERCKDLLEAKDGRSCRYYHGVHKMRDQYVLQSVHGLSNAWDIEDLV
ALGKRLRSCSYYAARELKQNASIIFCPYNYLLDPLIRESMEINLSGQILVLDEAHNIEDC
ARESASFTLDHKSLLMCRDELEGMVTNDIRATLHEPLRNFCYSLINWVQKSRSLMSDGGY
EVASKVWSGKDVLNIFHTLGITADTFSILKQKLKAVLEKEECVRLVSGKEEMMPIATISS
AASTVLKSLFMILDFLYREECRFAEDYRVALQKSYAWMNQNPPDVPDAQGFIARPGRQRH
SVRVKAEVLTLSFWCLNPAVAFSDLKGIRSILLTSGTLSPMGSFASELGVKFPIQLEANH
VINKSQVWVGTVGTGPLGRKLCATYQHTETYAFQDEVGALLHHVCQIVAKGVLCFLPSYK
MLDKLRDRWTNTGLWKKLELKKAVITEPRGGAKGDFDDVLQTYYDAVKYCNERDGALLIA
VCRGKVSEGLDFTDDNARAVVTIGIPFPNIRDLQVELKIKYNDQHCKTRGLLPGHRWYEI
QAYRALNQALGRCIRHKNDWGALILVDDRYRTNPNKYITGLSKWVRHLVQHHDTFSNAMQ
SLAAFYQVQQNAQAAPVASQTTGSAASAPHCDLDVQSQTQQQQDSPFTDCCHVQSEPEPN
KKAEPLQKMQTLPAQPHSSQKRPSPPLYPIFCSSPVSTSFKRPIFKEKALCNSKYLNQHS
ETTSYQSELKVQQQMLVTQEETETHVVKHGKIISENQTEPHKVTAESSTPTTTPGHEGES
PAADDENETEDQSVFFTPELFESKGDESSPLTETEGLVLGSGGSTLPLEDVFCFEQGHRQ
QEADRGSRQSAISASEVRMKLSLGQADEMIEREEGQETVPVLNLIRRTGSRLCRLSRSRQ
RSSSTPTAGDLLIGAGALTKDPLDVKCISS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgtggaatacacaattggaggagtgaagatccactttccctgcaaggcttat
ccttcccagttagccatgatgaacgcaattatacgagggttgaattctgagtgccactgt
ttgctagagagtcctacaggaagtggaaagagcttggccttgctgtgctctgctttgggc
tggcagcaagctcagtgtgctaaacttaaagaagcaggaaacaccggaccggacatgaac
cattcagacgaaaagtctggagatgacatcaccccttgtcagtcaaggtcacagctgcag
catcagctaaaacctcctgtgtcatcttgtatggatgcaaatcagcagctaggttcagca
gctgaaagtatgtcacaacaagaagagccacagactaaaatactgtctccagcctctcgt
ctaacagagaagttccggtcgtcccccacatctgactgtgagaaagataacgacttcttg
ccagaaaggaaacgcatgcgcactcctgatcataaggcagtggggtggaatccgctgtta
gctgttgatgaggaatatagcagctctgttagccggaaaaggcagcgcgtggaacgggga
gtgatattcatagatgatgatccagagctggacagtaaatcatcagattcccagaaccag
agcacacaggcaaccagccctgcagctgttttgtccccgtcatgcaatattccagaaacc
tgccccaattggctatgcgattcagacaatgtgaaggtcaagggcaaagatggcacaaaa
gggattcctaaaattttctttgggacgcgcacacacaagcaaataactcagattgcccac
gagctgcaacgcaccgcttactccagcgtgccaatgacaatcttatccagcagagatcac
acatgtgtcaatccaatggtggcacctcattccagccgcaatgaacgctgcaaggacctg
cttgaggccaaggatggaagatcatgccgctactatcatggtgtccacaagatgcgggat
cagtatgttctgcagtctgtccatggactttccaacgcctgggacattgaggatcttgtt
gcgctgggcaaacggctccgctcgtgctcttactatgctgcccgtgaacttaaacaaaat
gcctccatcatcttctgcccatataactatctgctggatccactgatcagggagagtatg
gagatcaatctgtcaggtcaaattttagtgctggatgaagcccacaacattgaggactgt
gcacgggagagtgccagctttactctggaccacaagagtcttctgatgtgcagagatgag
ctggagggcatggtgaccaatgacatcagagctactctacatgaaccactcagaaacttc
tgttatagcctaatcaactgggtccagaagagtcgaagcctgatgtctgatggggggtat
gaggtcgccagtaaagtgtggagtggaaaggatgtactgaacatttttcacacgttgggc
attactgctgataccttcagtattctgaagcaaaagttgaaagcggtgctagaaaaggag
gagtgtgttcgtttggtcagtggtaaagaggaaatgatgccgatcgcaaccatcagctca
gcagcgtccactgtcctcaaaagcctctttatgatcttggacttcctctacagggaggaa
tgcagatttgctgaagattaccgtgtagctcttcagaagagctatgcttggatgaatcag
aacccacctgatgttcctgatgcccagggcttcattgctcggcccggcagacaacggcat
agtgtcagagtaaaggctgaagttttgacccttagcttctggtgcctcaatcctgctgtg
gctttctctgacctgaaaggcattcgaagcattctgctgacatcaggaaccctgtcaccc
atgggctcctttgcctctgaacttggagtaaaattccccatccagctggaggccaaccat
gtcatcaacaagtcccaggtttgggttggcactgttggtacaggacccctaggcaggaaa
ctgtgtgccacctatcaacatactgagacctatgcctttcaagatgaagtgggagcgctg
ctacaccatgtatgccaaattgttgccaagggcgtcctctgctttctgccttcgtacaag
atgttggacaagctgcgggatcgatggaccaatactggtctgtggaagaaattagagcta
aaaaaagcagtaatcacagagccacgtggtggtgcgaagggggactttgatgacgtccta
caaacctattacgatgcagttaaatattgcaatgaaagagatggtgcactgctgatcgct
gtgtgtaggggtaaagtgagcgaaggcctggacttcacagatgacaatgcccgggctgta
gtcaccatcggaattcctttcccaaacatcagagatcttcaggtggaactgaagataaag
tacaatgaccagcactgcaagaccagaggtctcctcccaggccatcgctggtatgagatt
caggcctatagagccctgaaccaagccctagggaggtgcattcgacataaaaatgactgg
ggtgcgctgattctggtggatgaccgctacaggacaaaccccaataagtacatcacaggt
ttgtctaaatgggttcgtcaccttgttcaacatcatgacaccttcagtaatgccatgcag
tcactggcagcattctaccaggtgcagcagaatgcacaggcagctcccgtggccagtcag
acgactggctccgctgcctcagctcctcactgtgacttggacgtacagagtcagacacaa
cagcagcaggacagccccttcactgattgttgtcatgtacagtcagaacctgaaccaaac
aaaaaagcagaacctttgcagaagatgcaaacactgccagcacagccacactcatcccag
aaaagaccatcaccgcctctgtaccccattttctgctccagtcctgtcagcaccagcttc
aagaggccaatatttaaagaaaaagctctctgtaactcaaagtacttgaaccagcattcg
gaaacaaccagttatcaatctgagctcaaagtgcagcagcagatgttggtcacacaggaa
gagactgagacacatgttgttaaacatggtaaaatcatcagtgaaaaccaaacagaacca
cacaaggtgacggcggagtcttctacaccaacaaccactccaggccatgaaggtgaatca
cctgcagcagatgatgaaaatgaaacagaggaccagtctgtcttctttactccagaactt
tttgagagtaaaggagatgaaagcagtccgctgacagagacagaaggcttggttttaggg
tcaggcggttctactttgccattagaagatgtgttttgctttgagcagggccatagacag
caggaagcagacagaggaagcagacagagtgctatctcggccagtgaagtcagaatgaag
ctgtcattgggacaggcagatgaaatgatagaaagggaggaaggtcaggagacagtgcca
gtgctaaatctaatcaggagaacaggtagcaggctctgcaggctgtccaggtccaggcag
agatcttcctccactccaacagctggagatttgttgattggagcaggagctctcaccaaa
gaccctcttgatgtgaaatgcatcagcagctga
DBGET
integrated database retrieval system
