Betta splendens (Siamese fighting fish): 114868390
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Entry
114868390 CDS
T08231
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03020
RNA polymerase
bspl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114868390 (polr2d)
09124 Replication and repair
03420 Nucleotide excision repair
114868390 (polr2d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
114868390 (polr2d)
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114868390 (polr2d)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
114868390 (polr2d)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114868390 (polr2d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
Tfb4
Motif
Other DBs
NCBI-GeneID:
114868390
NCBI-ProteinID:
XP_029027753
UniProt:
A0A6P7PBV7
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Position
13:19731514..19733218
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AA seq
144 aa
AA seq
DB search
MATGGGAAPPHVGDIEEDASQLMFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgggaggcggcgcagctcctccacatgtcggtgatatcgaagaagatgcttca
cagctgatgtttcccaaagagtttgagaacgcagagactttgctgaactcagaagtccat
atgttgctggagcaccggaagcagcagaacgagagtgcagaggatgaacaggagctgtcc
gaagtcttcatgaagactctcaactacactgctcgattcagccgcttcaagaacagagag
accatcacagcggttcgcagtctcctcctgcagaagaagctccataagtttgagttggcc
agtttagcaaacctgtgtccagaagcagctgaagaggccaaagccctgatccccagcttg
gagggtcgctttgaggatgaggagcttcagcagattctggatgacatccagaccaagagg
agctttcagtactga
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