Betta splendens (Siamese fighting fish): 114868463
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Entry
114868463 CDS
T08231
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114868463 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bspl04515
]
114868463 (robo1)
Cell adhesion molecules [BR:
bspl04515
]
Immunoglobulin superfamily
ROBO family
114868463 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_5
Ig_PDGFR_d4
Unc5_NetrinR_N
Motif
Other DBs
NCBI-GeneID:
114868463
NCBI-ProteinID:
XP_029027913
UniProt:
A0A6P7PCA5
LinkDB
All DBs
Position
13:16606797..16779463
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AA seq
1697 aa
AA seq
DB search
MPRDARTVSSTMRRTRSGAVTLIIMVLLRVVQGQEVPLVPETGAAQDGAAEGATPAPNAE
HEDDNSLGYTGSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGER
VETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAI
LRDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGINIDDKDERITIRGGKLMI
TNARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPGSQVVLVDQSVEFRCEARG
DPVPTVRWRRDDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVAENMVGKAEASATLTV
HVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRFSV
SQTGDLTITDAERSDMGYYSCQALNIAGSVITKALLEVTDVVSDRPPPIIRQGPTNQTVA
VDGTVVLSCVASGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTCIA
STPSGEASWKAYLEVQEFGVPVQPNRPTDPNLIPSAPSKPEVTDVTRTSVTLSWKPNLNS
GATPTSYVVEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDPSP
ITDAVKTQDIPPTSQGVDHRQIQKELGDVVIHLHNPTILSSSSVRVQWTVEQQSQYIQGY
KVMYRPAPEGLQKSDWAVFEVRTPGEDSAVVPQLRKGVTYEFKVRPFFNEFQGTDSDVKI
GKTLEEAPSAPPREVTVTESEDNGTAIIVSWQPPPEEEQNGVVQEYKIWCLGNESRYHIN
RTVDGSTLSVLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDASGRISDPETSQNPL
SQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFTPT
VAYQRGGEGVSSAGRPGLLNIGDSATQPWLADTWPNSCSNHNDCSINCCTAGNGNSDSNL
ATYSRPADCIANYNNQMDNKQTNLMVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFVGP
GGQPTPYATTQLIQSSILGNNINSDRGTGGSGGGLGVGGEVNEKHCWKPTSLQQKQEMSS
QLQYSIMEQNKLNKDRYRGGDNPVPATIPYNQSHDSHTVGSYNSSDRGSSSTSGSQGQKK
GMRTPKLPKQSTMNWTDLLPPPPANPPPSRNTEEYSLPLEESCDPDMQCPMPPSHMYLQP
DELEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMHPMLQDTSDSHERRR
HAVSPPPPPRPLSPSHTYGYITSPLALDTDGMEEEDIMEEEEGDETDAEVAKMHYHHTHP
HTHPHHPHMHPRRLLLRGLEQTPASSMGDLESSVTGSMINGWGSASEEDNVSSGRSSAVS
SSDGSFFTDADFAQAVAAAAEYSGLRVAKYPNTQGQEAGGASARKYQINPSGHRPGSPVS
TDSNMSMAAVHRRPPKKQKQHPAGHPGNQRREAYNEDLPPPPIPPPAVLKSPTHPSKVAM
EGRGLISPKAGEVRDKRAGIGAYRTRDGSDPRTSSSERKDAQERQKTAHGGKGNKHESST
ANKARQHTGAEDILPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRRRGEGGRRNPADMGLN
TTGAFQHGDEELEMVES
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtgatgccaggacagtgagcagcacaatgcgccgcacacggtcgggggccgtg
accctcatcatcatggttctgctcagggtggttcagggccaagaggttccattagtccca
gagacgggagccgctcaggacggcgccgccgagggagcgacgcctgctcccaacgccgag
cacgaggacgacaactctctgggctacacaggatcccgtctacgccaagaggacacccca
ccgcggattgtggagcacccgtcggacctgattgtttctaaaggggagccggccaccctc
aactgtaaggcagaagggcggccgacccccacggtggagtggtacaaggatggggagcgg
gtggagacggacagggacaatccccgctcccagcgcatgctgctgcccagcggctccctc
ttcttcctgcgcatcgtccacgggcggcggagcaaaccggacgagggctcctacgtctgc
gtggcccgcaactacctgggagaggccgtgagccacaacgcctccctggaagtagccatc
ctacgtgacgacttcaggcagaacccggcagacgtgatcgtggcagcaggagagccggcg
gttctggagtgtcagcctccccgcggacatccagagcccacaatatcatggaagaaagac
ggaataaatatcgacgacaaggacgagaggatcactatacgtggaggaaagctgatgatc
acaaacgcccggaagagcgatgctgggaaatatgtgtgtgtcggcacaaacatggttgga
gagcgcgaaagtgaaatcgctgaactcacagtgctcgagcgccccagcttcgtacggcgc
cctggcagccaggtggtcttagtggaccaaagtgtggagttcaggtgtgaggcacgcggc
gacccggttcccactgtgcgctggaggcgggacgacggggacctgcccaaaggacgatat
gagatccgtgaggaccacaccctgaagatccgccgcctgacttccgctgacgtcggctcc
tacacctgcgtggccgagaacatggtggggaaggcggaggcctcggccacgctgaccgtg
cacgtgcctccagcgtttgtggtgagaccacggaaccaggtggttggggtgggcaggacc
gtcacctttcagtgtgaggccactggaaatccccagccagcaattttctggcagcgagaa
gggagtcagaacctgctgttctcctaccaacctcctcaaccctccagccgattttctgta
tctcagaccggggacctgaccatcaccgatgccgaacgctcagacatgggctattacagc
tgccaggcgctcaacatcgctggcagtgttatcaccaaggctctgctggaggtcactgat
gttgtgtcagaccgcccgccaccgataatccgacagggcccaaccaatcaaacggtggcg
gtggatggtacagtggtcctcagctgtgtggcatcgggcaaccccactcccaccatactg
tggaggaaagatggcgtcttggtgtccacacatgactccagggtcaaacagctggacact
ggtgcactgcagatacgctatgcaaagcttggtgacactggcacgtacacctgcatcgcc
tccacacccagtggcgaagcatcgtggaaagcctacttagaagtccaagagtttggagtc
ccggtccagccgaacagacctactgaccccaacctgattcccagtgccccttccaaaccg
gaggtcactgatgttactcgcacctccgtcaccctttcctggaagcctaaccttaattca
ggagcaacgccaacctcctatgtcgtagaggcctttagtcatgcatcagggagtagctgg
cagaccttggcagagcatgtgaaaactgagtcatttgtactgaagggcttgaagcccagt
gcagtctacctcttcttggtacgggcagccaacgcctatgggctgagcgatcccagtcct
ataaccgatgctgtgaaaacacaagatatccctcccaccagtcagggtgtggatcatcgt
cagatccaaaaggagttgggagatgtggtcatccacctgcacaacccgaccatcctctcc
tcctcctctgtccgggtgcagtggacagtggagcagcagtctcagtacatccagggctac
aaagtgatgtacaggcctgcaccagaggggctccagaagagcgactgggctgtgtttgaa
gtgcgcacccccggggaggacagcgcagttgtcccccagcttcggaagggagtcacgtat
gaattcaaagtgcgccctttcttcaacgagttccagggaacagacagtgatgtcaaaatt
ggcaagacattggaagaagcccccagcgccccacctcgtgaggttacagtgactgagagt
gaggacaatgggactgccatcatagtctcctggcaaccccctccagaagaggagcagaat
ggggtggtccaggaatacaagatttggtgcttggggaatgagagcaggtaccacatcaac
cgtacagttgacggctcaaccttatccgtgctgattcccagtctggccccagggatccgc
tacagcgtggaggtagcagccagcaccggggcaggtcccggggtcaagagcgatatcacc
ttcttccagcttgatgcgtcagggcgaatatcagaccctgagacctcacagaacccgctg
tcccagcagatctcagacgtggtcaagcagccggcctttatagcagggatcggagctgct
tgctggattattctcatggtcttcagtatctggttgtacagacacaggaagaagaggaat
ggactgtccagcagctatgcaggcatacgcaaagtgccatcctttactttcacgccaaca
gtggcatatcagagaggaggagaaggtgtaagcagcgctggaaggcctggtttgctgaac
attggagattctgccactcagccctggctggctgacacatggcccaactcctgctccaac
cacaacgactgcagcatcaactgctgcactgcaggcaatggcaacagcgacagcaacttg
gccacatacagccgtccagctgactgcatcgccaattataacaaccagatggacaataag
caaaccaacctcatggttccagagtcaggagtctatggagatgtagacctgtccaacaag
atcaacgagatgaagaccttcaacagccccaaccttaaagacgggcgctttgtgggccca
ggaggtcagcccacgccttacgccaccacccagctcatccagtcctccatcctgggcaac
aacatcaactccgaccgaggaactggagggagcggaggtggactcggggttggaggcgag
gttaatgagaaacactgctggaagcccacctcgctccaacagaagcaagaaatgagctcc
cagctgcagtacagcatcatggagcagaacaagctgaacaaggaccgctacagaggaggc
gacaaccctgtgccagccactatcccctacaaccagagccacgacagccacactgtgggc
tcctacaacagctccgaccgaggcagcagcagcacatcaggaagtcagggtcaaaagaag
ggaatgcgcacccccaaactacccaaacagagcacaatgaattggactgaccttctgccc
cctccccctgcaaacccacctccaagtcggaacacagaagaatactctctgccgctggaa
gaaagctgtgacccagacatgcagtgccccatgcccccttctcacatgtacctgcagcct
gatgagctcgaggaggaagaggagatggagcgggggcccactcccccgatacgaggcgca
gcatcctcccctgccgctgtgtcttacagccaccagtccacagccacgctcaccccctcg
ccccaggaggagatgcacccgatgctgcaggacacatctgacagccacgagcgcagacgc
catgctgtgagccccccaccccctccaaggcccctctctccttcacacacatatgggtac
atcaccagcccattggctttggacactgatggaatggaggaggaggacataatggaggaa
gaggagggcgatgagacggatgcagaagtggccaagatgcactaccaccacacccacccc
cacacacacccgcaccatccccacatgcacccgcggaggttgcttctacggggacttgag
cagacgcccgcgtccagcatgggcgacctggagagctcggtgaccggctccatgatcaac
ggatggggctcagcctctgaagaggataatgtctcttcagggaggtccagtgcagttagt
tcatcagatggatccttcttcactgatgccgactttgctcaagcagttgcagcagctgcg
gagtattcgggcctcagagtggccaagtacccaaatacacagggccaggaagctggagga
gcttcagcgcgaaaataccaaataaacccatcaggccaccgtcctggtagcccagtgtct
acagacagtaacatgagtatggcagccgtacacaggaggcctccgaaaaaacagaaacag
catcctgccggccatccaggaaaccagcggcgcgaagcctacaatgaagatctcccgcct
cctccaatcccacctccggccgtgctcaagtcccctacacacccctccaaggtggcgatg
gaaggccggggtttgatctcccccaaagcaggagaggtacgagacaagagagcaggaata
ggagcctatcggactcgagatggctcggatcccagaacaagctcatctgaacgcaaagat
gctcaggagagacaaaaaactgctcatggtgggaaagggaataaacacgagagtagcact
gccaacaaggcacgccaacacacaggtgcagaggacattctgccctacagccgaccacag
ttccccacagtgaatagcccccgggacccaagctcctctagctccatgtcctccagagga
tcaggtggccggcggagaggagaaggaggtcgtagaaatcctgccgacatgggcctcaac
accactggagcctttcaacatggagatgaagaactagagatggttgaaagctga
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integrated database retrieval system