Betta splendens (Siamese fighting fish): 114868491
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Entry
114868491 CDS
T08231
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bspl03000
]
114868491 (hnf1ba)
Transcription factors [BR:
bspl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
114868491 (hnf1ba)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
HTH_5
Motif
Other DBs
NCBI-GeneID:
114868491
NCBI-ProteinID:
XP_029027970
UniProt:
A0A6P7PDB4
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Position
13:complement(4589008..4603086)
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AA seq
572 aa
AA seq
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MFSKMVSKLTSLQQELLSALLDSGVTKDVLIQALDDMDPSPPGFGVKLESLPMSPAAPPS
GKINGPDTDSKVFHTLTNGHSKGKLSGDEGSEDGDDYDTPPILKELQSLNTEEAVEQRAE
VERMLAEDPWRAARMIKGYMQQHNIPQREVVDITGLNQSHLSQHLNKGTPMKTQKRAALY
TWYVRKQREILRQFNQAVQGSGGNMADKGNQDPAFFFPEFNPTGQGMGQPGEELSSEPSC
KKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLGS
NLVTEVRVYNWFANRRKEEAFRQKLAMDAITAPTHSINPLLSHSSPHHPQTSASPPMRYS
QAPGEVTSSTTISHHGSNAMATSQSVLQQVSPGGMDHSHSLLSPDAKMISGSGGGLPPVS
TLTNIHSSHHSHQQTQNLIMPLSGVMAIAQSLNTSQSQTVPVINSVAGSLAALQPVPFSQ
QLHSPHHQSLMQQSPSHMSQQPFMATVTHSHMYPHKQEPPQYSHPSRFPSAMVVTDANSL
STLSSMSTSKTDAPVNKMVQLGGLSWCPLQAW
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgttctctaaaatggtatccaagctgacatccctgcagcaggagctcctcagcgccctg
ctggactcaggagttaccaaagatgttttgattcaggccctggatgatatggacccgagc
ccgccgggctttggagtaaaactggagagtctgcccatgtctcccgctgctcctccgagc
ggcaagatcaacgggccggacaccgattccaaagtcttccacacgctcaccaacggccac
agcaagggtaagttgtccggggacgagggctccgaggacggcgacgactacgacacccct
ccgatactgaaggagctccagtcgctcaacacggaggaggccgtcgagcagagggcggag
gttgagcgcatgttggctgaggatccgtggcgcgctgcccgcatgatcaaaggttacatg
cagcaacacaacatcccacaacgggaggtggtggacatcacgggcctgaaccaatctcac
ctctcacagcacctcaacaaaggcacacccatgaaaacgcaaaagcgagcggccctctac
acctggtatgtcaggaagcagcgggaaattctcagacagttcaaccaagcagtgcaaggt
tctggcggcaatatggcagacaagggcaaccaggacccggcgttctttttcccagagttc
aaccctacaggtcagggcatgggtcagccgggcgaggagctcagcagtgaaccctcctgc
aagaaaatgagacgcaaccgcttcaagtggggccctgcgtcccagcaaatcctgtaccaa
gcctacgagcgacaaaagaaccccagcaaggaggagagagaggccttggtggaggagtgc
aacagagcggagtgtcttcagagaggcgtctccccatcgaaggctcagggccttggctcc
aatctggtaaccgaagtgcgggtctacaactggtttgccaaccggcgtaaggaggaagct
ttcaggcagaagctggccatggacgccatcacggctccgacccacagcatcaaccctctg
ctctcgcacagctcgcctcatcatccccagaccagcgcttcacctcccatgcgttacagc
caggccccgggtgaggtcacctcctccacgaccatcagtcaccacggcagcaacgccatg
gcgaccagccagtcggtcctccagcaggtgtctccaggaggaatggaccacagccacagt
ctgctgtcacctgacgccaagatgatttccggttcgggtggaggactccccccagttagc
acactgacaaacatccacagttcccaccacagccaccagcagacgcagaacctcatcatg
cctctatctggagtcatggccatagcacagagtctaaacacgtcgcagtctcagacggtg
cctgtgatcaacagtgtggcaggaagcctcgcggcgctgcagcctgtgccgttctcccag
cagctccacagcccccaccatcagagtctgatgcagcagtcccccagtcacatgagccag
cagcctttcatggcgaccgtcacacattcgcacatgtaccctcacaagcaggagcctccg
caatactctcacccttcacgtttcccatcagccatggtggtcacagacgccaacagcctc
agcaccctcagctccatgtccacaagcaagacggatgctcctgtaaacaagatggtgcaa
cttgggggtctctcctggtgtcctcttcaagcctggtga
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