Betta splendens (Siamese fighting fish): 114869071
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Entry
114869071 CDS
T08231
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114869071 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114869071 (exosc8)
Messenger RNA biogenesis [BR:
bspl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114869071 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114869071
NCBI-ProteinID:
XP_029028739
UniProt:
A0A6P7PFL3
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Position
14:5054123..5056692
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AA seq
277 aa
AA seq
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MAAGFKTAEPLEYHRSFLKENCRPDGRVLSEFRTTTLNIGSISTADGSALVKVGSTTVIC
GIKAELANPAVETPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVID
TEDLCIERGKLCWVLYCDIICLDYDGNILDACVIALLAALKNTKLPEVTVNTETSTPEVN
VEKRSLLHIHKHPVAASFCVFDDSILIVDPTDEEEKLSTAQLTVVTDEEGQLCSVHKPGG
TSLSGEKLQECISRATARQREIQKLIDKVIKSIKTAK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggttttaagacggctgagcctctggagtatcacaggagctttctgaaagaa
aactgtagacctgatggacgggtgctctcagaattcagaaccaccacactgaatataggc
tccatttcaactgcagacggttcagccctggtgaaggttgggagcaccacagtcatttgt
gggatcaaagcggagttggcgaaccccgcagtggagacgcctggtaaaggctacatcgtg
ccgaatgtggacctgcctcctctgtgttcatctcgctttcgaccgggtccaccgggagaa
caggcccaggctgcaagccagttcattgctgatgtaatcgaaagttctgaagtgatagat
acagaggatctgtgcatcgaaagaggaaagctctgctgggtgctctactgcgacataata
tgtcttgactacgatgggaatatattggatgcttgtgtcatcgccctgctggctgccctc
aaaaacacaaaactcccagaggtcactgtcaacacagagacatctacaccagaggttaac
gtagaaaagagaagcctgctgcacattcacaaacacccagtcgctgcttcgttttgtgtt
ttcgatgactccattctgatcgtagaccccacagacgaggaggagaaactttcaactgct
cagctgactgtggtgaccgatgaggaaggtcagctctgctctgtgcacaaaccaggtgga
acgtcactttcaggagagaaactgcaggaatgtatcagccgagcaacagcgcggcagaga
gagatccaaaaactaatcgacaaagtcataaaaagtataaaaacagccaaataa
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