Betta splendens (Siamese fighting fish): 114869148
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Entry
114869148 CDS
T08231
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X2
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114869148 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bspl04040
]
114869148 (trpv1)
Ion channels [BR:
bspl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114869148 (trpv1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Peptidase_M9_N
COG5_C
Motif
Other DBs
NCBI-GeneID:
114869148
NCBI-ProteinID:
XP_029028897
UniProt:
A0A6P7PET9
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Position
14:12030844..12037366
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AA seq
785 aa
AA seq
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MAKSEMFGFSLETDDRTEEERSRQKAKTSGFSRGQEAPKAPMDTDYQEEMEATKPQIRFN
LNFDKGIRGKAQTDAKADSRRFDIDRLFEAVASGDVRRLDGLHQYLHQNMKKLSDSLYQS
YGKTALMKALLHLKKDTNTNTSTNPTVDLLIDISEKLGDIQEFVNAAYTSVYYKGQTALH
IAIERRSLRYVKLLVSKGADIHARACGTFFQQHDGPSFYFGELPLSLAACTNQSDIVDFL
LDNEYQRANPKLVDSQNNTVLHALVVLADNSEENTAFVTSMYDRVLTTAARLYPKVKLED
GENHMGLTPLKLAAKTGKIGIFSHILKREFLDNGTKHLSRKFTEWVYGPVHCFLYDLASV
DSHEDNSVMEILIYSCEIPNRHEMLQKEPLNRLLEEKWTKFAGQMFGFHFLVYFLYLILF
TVVAYNKKDTEPPFPIENTTADILYAVGLLATTVANIYFFVVGIIDMRRKHPKLQTMMID
GYYEILFFVQGSLFLISAALYWGGRYEYLGFLVTCLALSWINLLYYSRGLEHMGIYSVMI
QKMILSDILRFLFVYVVFLFGFSAAVVTLLIEPPVKNNTVNRQPRDSLFTATGPEDQCVK
PTFRNISYTTLELFKFTIGMGDMEFTEDYKYKEVFYMLLIGYIILTYILLFNMLIALMNR
TVENITMESTTIWKLQRAITILDMEKRLPRCLRKAFRCGVDKTLYTALGADRRRCFRVEE
VNWNQWNTNQGKINEDPGCCDYSQNPDSDRSRPQRGRSWRGLFTESRRRQQAESTEMTPM
STTPV
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagtcagagatgtttggcttctccctggagacggacgacaggacggaggaggag
agatcacggcaaaaggcgaagacgtccggtttcagtcgggggcaggaggccccgaaggcc
cccatggacacggattaccaggaagaaatggaggcgaccaagcctcaaatcagattcaac
ctcaactttgacaaagggattcgaggtaaagcgcagaccgacgcgaaggccgacagcagg
aggtttgacatcgacaggctgtttgaggcggtggccagcggggacgtgaggcgcctggac
ggcctgcaccagtacctgcaccagaacatgaagaagctctccgacagcttatatcagtct
tacggcaaaacggccctgatgaaagcgctgctgcatctcaaaaaggacaccaacaccaac
accagcaccaacccgaccgtggacctgttgatcgacatctccgagaagttgggagacata
caggagttcgtgaacgcggcctacaccagcgtctattacaaaggccaaacggcgcttcac
atcgccattgaaaggcggagcctccgctacgtgaagctgctggtcagcaagggggccgac
attcacgcccgagcctgcgggacattcttccagcaacatgacggccccagcttctacttt
ggcgagctgcctctgtctctggccgcctgcaccaaccagtccgacatcgtggacttcctg
ctggacaacgagtaccagcgggccaacccgaagctggtggactcccagaacaacacggtg
ctgcacgcgctggtggtgctggccgacaactccgaggagaacacggcgttcgtcaccagc
atgtacgaccgcgtgctgacgacggcggcgcggctgtacccgaaggtgaagctggaggac
ggcgagaaccacatgggcctcacgccgctcaagctggccgccaagacgggcaagataggg
atattttctcacatcctcaaacgggagtttctggacaacggcactaaacacttgtcccgc
aagttcaccgagtgggtctacgggcccgtccactgcttcctttacgacctggcctccgtg
gattcacacgaggacaactcggtcatggagattctgatctacagctgcgagatccccaac
cgccacgagatgctccagaaggagcctctgaaccggctgctggaggagaagtggaccaag
ttcgcgggtcagatgttcggcttccacttcctggtctacttcctgtacctgatcctcttc
actgtggtggcgtacaacaagaaggacacagagccaccgttccccatagaaaacaccaca
gcagacatcctgtatgctgtaggcctgctggcgacaacagtggcaaacatctatttcttt
gtggtagggatcatagacatgaggaggaagcatccaaaactccagactatgatgattgat
gggtattatgagattcttttttttgtgcaggggagcctcttcctcatctcagccgcactg
tactggggcgggaggtacgagtacctgggcttcctggtgacgtgtctggctctcagctgg
atcaacctgctctactactccaggggcctcgaacacatgggcatctacagcgtcatgata
cagaagatgatcctcagtgacatcctgcgcttcctgtttgtttacgtcgtcttcctcttt
ggattttctgcagcggtggtcaccctgctcatagagcccccagtgaaaaacaacacggtg
aaccggcagccccgcgattccctgtttacagccactggccccgaggatcagtgcgtcaaa
cccaccttcaggaacatctcctacaccacgctggagctcttcaagttcaccatcggcatg
ggcgacatggagttcaccgaggactacaagtacaaggaggtgttctacatgctgctcatc
ggctacatcatcctcacctacatcctgctgttcaacatgctcatcgccctcatgaaccgc
accgtggagaacatcaccatggagagcaccaccatctggaagctgcagagggccatcacc
atcctggacatggagaagaggctgcccaggtgtctgaggaaggcgttccgctgtggggtg
gataaaaccctctacactgctctcggagccgatcgacgacggtgcttcagagtggaggaa
gtcaactggaaccagtggaacacgaaccagggcaaaatcaacgaggaccccggctgctgc
gattacagccaaaatcccgactcggacaggagcagaccacagagagggaggagctggaga
ggtctgttcacagagagcaggaggcgacagcaggcagagtccacagagatgactcctatg
agcaccacaccagtgtga
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