Betta splendens (Siamese fighting fish): 114869194
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Entry
114869194 CDS
T08231
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04142
Lysosome
bspl04144
Endocytosis
bspl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114869194 (cltca)
04142 Lysosome
114869194 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114869194 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114869194 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bspl04147
]
114869194 (cltca)
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
114869194 (cltca)
Exosome [BR:
bspl04147
]
Exosomal proteins
Proteins found in most exosomes
114869194 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
114869194
NCBI-ProteinID:
XP_029029023
UniProt:
A0A6P7PF58
LinkDB
All DBs
Position
14:12611000..12633502
Genome browser
AA seq
1681 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQTQVVIIDLADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKIEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISAKHNVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENLIPYITNVLQNPDLALRLAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPDQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTPALTELFESFKSFEGLFYFLGSIVN
FSQEPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASVL
LESNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELAEELLSWFLQE
NKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDKLETSESLR
KEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQPYGYGYQAPAAAPAAYGQPAAPGFSYG
M
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgctttcaggagcacctgcagctccaaaacctagggatc
aatcctgccaacattggcttcagcacccttaccatggagtcagacaagttcatctgtgtc
agagagaaggttggcgagcagacccaggtggtgatcatcgatttggccgaccctaacaca
ccaatccgcaggcccatatccgctgacagcgccataatgaatccagccagcaaagtcatt
gcacttaaagctgccaaaacccttcagatattcaacattgagatgaagagcaagatgaag
gcacacaccatgacggacgatgttaccttctggaagtggatttcccttaacacagttgcg
cttgtgactgacaatgccgtctaccattggagcatggagggtgactcgcagcctgttaaa
gtgtttgaccgtcactccagcttggcaggctgccagatcatcaactatcgcactgacgcc
aagcagaaatggcttcttctcattggcatctcagcccagcaaaatcgggttgtgggagcc
atgcagctttactctgttgacagaaaggtatctcaacccattgaaggtcatgctgccagc
tttgcccagttcaagattgagggaaatgcggaagaatctacattgttctgctttgctgtc
agaggccaggctggaggaaagctgcacatcattgaagtggggacaccaccaactggcaac
cagccttttccaaagaaagcagtagatgtgttcttcccgcctgaagcccagaatgacttt
cctgtggccatgcagataagcgccaagcacaatgtggttttcctcattaccaaatatggc
tacatccatctgtatgacttggagacaggaacctgcatttacatgaaccgcatcagcgga
gagaccatctttgtcacagctccacatgaggcgacctcaggaatcatcggggtcaataga
aagggacaggtgctgtcagtatgcgtggaagaggaaaatctcatcccatacatcaccaat
gtactgcagaatccagacctggctcttcgcttggctgttcgcaacaaccttgctggtgct
gaggagctctttgctcgcaagttcaacaacctgtttgctgccggcaactactctgaggcg
gccaaagtggcggccaatgcaccaaagggtatactgcgcaccccagacaccatccgtcgc
tttcagagtgttccaacccagcccggccagacctcccctttgctgcaatattttggtatc
ttgctggatcaaggccagctcaacaagtttgagtccctggagctttgcaggcctgttctc
cagcaaggacgaaagcagctcttagagaagtggctaaaggaagataagttggagtgttca
gaggagttgggtgatcttgtaaaggcagtggatcctacactggctcttagtgtgtacctg
agggcaaatgtcccaaacaaggtcatccagtgctttgctgagactggccagttccccaag
attgtcctgtatgcgaagaaggtgggctacacaccagactggatatttctgcttaggaat
gtgatgcgaatcaacccagatcaaggcctgcagtttgcccagatgctggtgcaggatgaa
gagccactggctgacattacgcagattgtggatgtgttcatggagtacaacctgatccag
cagtgcacctcattcctcctggacgctctgaagaacaacagaccctcggaaggacctctg
cagactcgtctgctggagatgaaccttatgcatgctccgcaggttgctgatgccatcttg
ggcaatcagatgtttaccaactacgatcgtgcacacatcgcccaactctgtgagaaggct
ggactcctgcaaagggcgctggagcattacactgacctgtatgacatcaagcgcgctgta
gtgcatacacatctactaaacccagagtggttggtgaacttttttggctcgctgtcagtg
gaagactctctggagtgcctcagggccatgttgtcagcaaacattcgtcagaacctgcag
atctgtgtccaggtggcttccaagtaccatgagcagttgactacacctgctctcactgaa
ctctttgagtccttcaaaagttttgaaggtctgttctacttcctgggctctattgtgaac
ttcagccaggagcctgaggtccactttaaatacatccaggccgcctgcaagacaggccag
atcaaagaggtggagagaatctgtagagaaagcaactgctatgacccagaacgtgtcaag
aacttcctcaaggaagccaaactcaccgaccagctgccgctgatcattgtctgtgaccga
tttgatttcgtccatgaccttgtcctctacctgtaccgcaacaacctgcagaaatacatt
gagatctatgttcagaaggtgaatcccagccgtctgcctgtagtggttggaggtctgttg
gacgtagactgctcggaggatgtcatcaaaagcctgatcctggttgtcaggggacagttc
tctactgatgaactggtcgctgaggtggaaaaaaggaacagactgaagcttctgctgcct
tggcttgagtcacgcatccacgaaggctgtgaggagcctgccacccataatgctctggca
aagatctacattgacagcaacaacaaccctgaacggttcctacgggaaaacccatactac
gacagccgtgtggtaggaaagtactgcgagaagagagacccccacctggcttgtgtggca
tatgagagaggacagtgtgaccaggagctgatcaatgtctgcaacgagaattctttgttc
aaaagtttatctcgctaccttgtccgacgcaaagatccggacctgtgggcaagtgtgctg
ctggagagcaacccctttagacgaccactgattgaccaggtggtgcagacagcactgtct
gaaacccaggacccagaggaggtatctgtcacagtcaaggccttcatgacagcagatttg
cccaatgagctcattgagctgctggagaagattgttttggacaactctgtcttcagtgaa
cacagaaacctgcagaacctgttgatcctgacagcaatcaaagctgaccgtacacgtgtg
atggagtacatcagcaggctagacaactatgatgctcctgatattgccaacatcgccatc
agtaatgaactctttgaggaagcctttgccatctttaagaagtttgatgtcaacacctct
gctgtgcaggtgctgattgagcatattggcaacctggaccgcgcctatgagtttgcagaa
cgctgcaatgaaccagctgtgtggagccagctggctaaggctcagctacagaagggtctg
gttaaggaggccatcgactcctacatcaaagctgatgacccctctgcatacatggaggtg
gtacaagctgcagatcagagcggtaactgggaggacttagtcaaattccttcagatggct
cgtaagaaggcccgcgaatcgtatgtagaaacagagctcatctttgccctggccaaaacc
aaccgcctggctgaactggaggagttcattaatggaccaaacaacgctcacatccaacag
gtcggtgaccgatgctacgatgagaaaatgtatgaggctgctaagctgctatacaacaac
gtgtccaactttggtcgcttggcttcaactctggtacacctcggagagtatcaggctgct
gtggatggtgcccgaaaggccaacagcacccgtacctggaaagaggtgtgctttgcctgc
gtggacggaaaggagttcagactagcccagatgtgtggtcttcacattgtggtgcatgct
gacgagctggaggagctgatcaactactaccaagaccgtggttactttgaggaactgatc
accatgctggaggctgctttgggtctggagcgggctcacatggggatgttcacagagctg
gcaatcctgtactccaagtttaagccccagaagatgagggaacatctggagctcttctgg
tccagagttaacatcccaaaggtcctgagagcagcagagcaggcccacttgtgggctgaa
ctggtcttcttgtatgacaagtatgaggagtacgacaacgccatcatcactatgatgaac
caccccacagacgcctggaaggaaggacagttcaaggatatcatcaccaaggtggccaat
gtagaactgtactacaaagccatccagttctatctggagtttaagcccttgttactgaat
gatttgctcatagtgctatctcccagactggaccactctcgtgctgtcaacttcttcagc
aaggtgaaacaactgcctctggtcaagccctacctgcggtcagtacagaaccacaataac
aagtcagtcaatgaagcacttaataacctcttcatcacagaggaagactatcaggcactg
aggacatcaatagatgcctacgacaactttgacaacatctccctggcccagcgcttggaa
aagcatgagcttatcgagttcaggagaatcgctgcctacctcttcaaaggcaacaaccgc
tggaaacagagtgtggagctctgcaagaaggataagctctataaggacgccatgcagtat
gcttcagaatccaaggacatcgagctggcggaggagctgttgtcctggttcctgcaggag
aacaagaaggagtgttttgccgcctgccttttcacctgctatgacctgctgcgccctgac
gtggtgttggagacagcttggaggcacaacatcatggacttttctatgccatacttcatt
caggtcatgagggagtacctcagcaaggtagataaactagaaacctctgaatccctaagg
aaagaggaggagcaggcaacagagacgcaacccattgtctacggcacacctcagctgatg
ttaacagcaggccccagcgtaccagtgcccccccagcagccttacggatatggctaccag
gctcccgccgccgcccctgccgcatacggtcagcctgcagctccaggcttcagctacggc
atgtaa
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