Betta splendens (Siamese fighting fish): 114869330
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Entry
114869330 CDS
T08231
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114869330 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bspl03041
]
114869330 (ddx46)
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114869330 (ddx46)
Spliceosome [BR:
bspl03041
]
Complex A
U2 snRNP components
U2 related factors
114869330 (ddx46)
Complex B
114869330 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
114869330
NCBI-ProteinID:
XP_029029312
UniProt:
A0A6P7P9E7
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All DBs
Position
14:complement(1689984..1697306)
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AA seq
1063 aa
AA seq
DB search
MGRESRHYRKRSTSRGRSGSRSKSRSPDKRSKKEDRDRDRSRRERSRSRDRRRSRSRDRK
RARRSRSRDRRRSRSRDRRRSGSRTRTRRSRSGSPSKSKKTDEKSRSKEKDSVEPLSEKK
KVKEEKEDEKAEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQG
KKWSLEDDDDDDEDGSAPMEGDDDEDGDGKEESKEKEIKEEKKEEGEKEKESPMELQPEE
DDVDPLDAYMEEVKQEVKKFNMGAMKGNDKKGAMTVTKVVTVVKTKKGPHTHKKKGELME
NDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHGKIQYESYRKNFYVEVPELAKMT
QEEVNTYRLELEGITVKGKGCPKPIKTWVQCGVSMKILNALKKHSYEKPTPIQAQAIPAI
MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEDSEGPISVIMTPTRELALQITKECK
KFSKPLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYV
VLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILAKPIEVQVGGR
SVVCSDVEQHVLVIDEDQKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPC
MSLHGGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHR
AGRTGRAGNKGYAYTFITEDQVRYAGDIIKALELSGAPVPPELEQLWASFKDQQKAEGKT
IKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKR
VKDLSAPGAAAGAAGTVSATAAAPGGLPGLGPTSAGNIQKLEMAKRLALKINAQKNLGAE
AQDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAET
VKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYL
AIESANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtcaagacactacaggaagcgctccacgtctcgggggcgctcaggtagt
cgatcgaagagtcgctccccggacaaacgctccaagaaagaagaccgggaccgagaccga
agcaggagagaacgatcccggagtcgggaccgccgcaggtcccggtccagagacagaaag
cgagctaggcgctccaggagccgtgacaggagaaggtccagaagcagagacaggaggagg
tcagggagcaggaccagaacccgaaggtctcggtctggaagccccagcaaaagcaaaaaa
acagatgagaaatcaaggagcaaagaaaaagacagcgtagagcctttatctgaaaagaaa
aaggtcaaagaggagaaagaggacgagaaggcagaggatcaagactttgaccaaaacaaa
ctggaggaggagatgaggaagaggaaggagcgagtggagaaatggagggaggagcagagg
aagaaagccattgagaatatcggcgagatcaagaaagaactggaggagatgaagcagggc
aaaaagtggagcctggaggatgatgatgatgatgatgaggatggttcagcacctatggaa
ggtgatgatgatgaagatggagatggaaaggaagagagtaaggagaaagagattaaagag
gagaagaaagaggaaggtgagaaggagaaggaaagtccaatggagctgcagccagaagag
gatgacgtggatcctctggatgcctacatggaggaggtcaaacaggaggttaagaagttc
aacatgggagccatgaagggaaatgataagaaaggagcaatgactgtaaccaaagtggtt
acggttgttaaaaccaaaaaaggtcctcacactcacaagaagaagggtgagctgatggag
aatgaccaggacgccatggagtattcatcagaagaggaggaagtggatctgcaaacggct
ctaacaggctttcagaccaagcagaggaaagtccttgagcctgttgaccacggaaagatt
cagtacgagtcttatcgtaaaaacttctatgtggaggtgcctgaactggccaaaatgact
caagaagaagtaaacacatacaggctggaactggaaggcatcactgtcaaagggaagggc
tgcccgaaacccatcaagacctgggtgcagtgtggagtatcgatgaagatcctcaacgct
ctgaaaaagcatagctatgagaagcccacgcccatccaggctcaggccatccctgcaatc
atgtcgggccgggaccttattggcatcgctaagaccggcagtgggaaaacaatagccttc
ctgttgcctatgttcagacacatcatggatcaaaggcccctagaagactctgagggaccc
atctctgtgatcatgactccgactagagagctggctctgcagatcaccaaggaatgtaag
aagttctctaaaccgctggggctcagggtggtgtgtgtttatggaggcactggtatcagc
gaacagattgctgagctgaagagaggagcagagatcattgtctgcacaccaggacggatg
attgacatgttgggggccaacagtggtcgagtcaccaacctgcgcagagtgacgtatgtt
gtgttggacgaagcagacaggatgttcgacatgggctttgagcctcaggtgatgcgcatt
gtggacaacgtgcgtcccgaccgtcagaccgtcatgttttcagctaccttccctcgggcc
atggaggcgctggctcggaggatcctggccaagcccatcgaggttcaagtgggcggtcgc
agtgtagtctgctctgacgtggagcagcatgtgctggttattgatgaggaccagaaattc
ttgaagttgctggagattctgggtcactaccaggaaaagggctcagtcatcatctttgtg
gacaaacaggagcatgcagatggactcctcaaagacctgatgaaggcttcttacccctgc
atgtctctacacggaggcatcgaccagtacgacagagacagcatcatcaatgactttaaa
aacggagcctgtcgtctaatggtggccacctctgtggccgccagaggcctggatgtcaag
cagctcatcctggtggtcaactacaactgtcccaaccactatgaggactacgtccacagg
gcggggcgcacgggccgagcaggaaacaagggttacgcttacaccttcatcacagaggat
caggttcgatatgccggcgatatcatcaaagccttggaactgtcaggggctcctgtacca
ccagaactcgagcagctctgggcgtctttcaaagaccagcagaaagcggaaggaaaaacc
attaaaagcagcagcggcttctcaggaaaaggtttcaagtttgatgagacagaacacgct
ctggccaacgagaggaaaaagttacagaaagctgctcttggactgcaagactctgacgac
gaggatggggccctggatatcgaggagcaaatcgagagcatgttcaactccaagaagaga
gtgaaggacctgtctgctcccggggcggctgctggagcagcaggaacggtctctgccacg
gcagctgctccaggaggactcccaggcctcggacccacatctgctggaaacatccagaaa
ctggagatggccaaaaggctggcgctcaagatcaacgctcagaagaacctgggtgctgag
gctcaggatgtgatgcagcaggccaccaacgccatcctgcgaggtggcacgatcatgaca
ccctccgtgtcggctaagaccatcgcggagcagttggcggagaagatcaatgccaagctg
aactacacccctgtggagaagctggaggaggagcggcaggcggctgagcaggcggagacc
gtcaagcgatacgaagaggagctggagattaatgacttccctcagacggccaggtggaag
gtgacgtccaaagaagcactgcagaggatcggcgaatactcagaagctgcgatcaccatc
agaggaacctacttccctccaggcaaagagcccaaagagggggagcgcaagatctacctg
gctattgaaagtgctaatgaactggctgtgcagaaagccaagacagagatcacgcgtttg
atcaaggaagagctcatcagattgcaaaactcataccaaccgacgagcaaaggccgttac
aaagtgctgtag
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