Betta splendens (Siamese fighting fish): 114869334
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Entry
114869334 CDS
T08231
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114869334 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114869334 (rabgef1)
Membrane trafficking [BR:
bspl04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
114869334 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
114869334 (rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
114869334
NCBI-ProteinID:
XP_029029320
UniProt:
A0A6P7PJ54
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All DBs
Position
14:9597900..9602394
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AA seq
512 aa
AA seq
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MSQRTERRRGIHVDQSDLLCKKGCGYYGNAAWQGLCSKCWREEYQRVRQKQIQDDWALAE
KLQREEEAAYASSQGAQTQSHSQSTPPQTGHASLGPFSKFEEKKTNEKTRKVTTVKKFFS
PSSRTPPKKETQEAKTPSPSVSRHASFETEQVSKDFVDFLKNLQKPGREIHKQCRAFIVN
MSSKKELGADELSECVQDFYQNMSDRLMSHFKGSSDSVEQVMDQVEKYIMTRLYKSVFCP
EITDDEKKDLATQDRIRALHWVTIQMLCVSMDEEIPEVSDNVLKAITNIIEMDSKRVPRD
KLACITRCSKHIFSAIRITKKEPASADDFLPSLIYIVLKANPPRIQSNIQYITRFCNPSR
LMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSAEEFERYMSGQASPRISSSEADWPHAGPT
PAVTATNPVLTQLNHNLELLSGLSSRQESLMAAARSLQADLQAWPERVQREVHSILEKYP
LEVMSCTASAIDANNMDNDNLPSPLTPQVFAG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcggacagagcgacggcgggggatccatgtggaccaatcagacctgctgtgc
aaaaagggatgcggttactacggcaacgcagcatggcagggtttgtgctccaagtgctgg
agggaggagtaccagcgggtacgacagaagcagatccaggacgactgggccttggctgag
aagttgcaacgagaggaggaggcagcgtatgccagtagtcagggagcgcagacccagtcc
cactcccagtccactccaccccagacaggacatgcgtctctggggcctttttccaagttt
gaggagaagaagactaatgagaagacacggaaagtaaccactgttaaaaagtttttcagc
ccgtcgtcacgtactcctcccaagaaagaaactcaggaggccaagacacccagtccttcc
gtcagccgtcacgccagcttcgaaacagaacaagtgtccaaggactttgtggacttcctg
aaaaatcttcagaagcctggtcgggagatccacaagcagtgccgagcgttcatcgtaaac
atgtccagcaagaaggaacttggtgccgatgaactgtcagagtgtgtccaagatttctac
cagaacatgtctgatcgactgatgagtcattttaaaggttcttcggactctgtggagcag
gtgatggatcaagtggaaaaatacattatgactcgtctgtataagagcgtgttctgccca
gaaatcaccgatgatgagaagaaggacttggccacacaggacaggataagggccctacac
tgggtgaccatccagatgctgtgtgtgtctatggatgaagaaatccctgaagtctctgat
aatgtgctcaaagcaataacaaatattattgagatggactcgaagagggttcctcgggac
aaacttgcctgcatcacgcgctgcagcaaacacatcttcagtgccatcaggatcaccaag
aaggagccggcttctgctgacgacttcctcccgtcgctcatttacattgtgctcaaggct
aaccctccacgaatccagtccaacatccagtacatcacccggttctgcaaccccagcaga
ctgatgaccggagaggacggatactacttcaccaacctgtgctgtgcagtggccttcata
gaaaagctggacgcccagtctctcaacctgtctgcagaggagtttgagcgctacatgtca
ggccaagcttcaccacgaatcagcagctcggaggcagactggccccacgctggccccacg
cctgccgtgacggccaccaaccccgtgctgactcagctcaaccacaacctggagctgttg
tcgggcctcagcagtcggcaggagtcgctgatggcggccgcgcggagcctgcaggccgac
ctccaggcgtggccggagcgggtgcagagggaggtgcacagtatcctggaaaagtaccca
ctggaggtgatgtcatgcacagcgtctgccattgatgccaacaacatggacaatgacaac
ctgccatcacccctcacgcctcaggtgtttgccgggtag
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