Betta splendens (Siamese fighting fish): 114869443
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Entry
114869443 CDS
T08231
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80
KO
K20775
BRCA1-A complex subunit RAP80
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114869443 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bspl03400
]
114869443 (uimc1)
DNA repair and recombination proteins [BR:
bspl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
114869443 (uimc1)
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
114869443
NCBI-ProteinID:
XP_055358095
UniProt:
A0A9W2X8G4
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Position
14:922137..929432
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AA seq
937 aa
AA seq
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MSLRRAPALVTEQQAAMALRERPAGAGAPQRLQAEQAQEDAAVGDEDEFSSSLLPPASAR
DRRRRERGNKSKCKEMSEEEMMDLALRLSEREATVTASRLKQEEEAVMKAIKESMVNQTK
TVLSSQSQSLLADQHADASARLCSPRKPLYSNGKKISANSDEGENCPTQTGEVKAGEENN
NRNKKWKREGRGSLPEKPDLMQTQDVASQASPCSSESVSPQSSDSTQIDDCPLPKSPVFP
LTGCRATVCMSRLSQDLLETCKVSGFVSCSQDSWIQKSLVEGKSPTFPKSPMNFPAGPKS
PVYDGGDDGERMSPDGGGSPAFGSTLLQDQSQSAWKPQVCKNSGFTFSSQESFSFTGRSA
SCRPDSPVFPGSRPAVEASAICLNPVLSGSGSTSPVYGCTGRRRTLDPIQMNSSVVPLSA
ELRGSSGAEPSQSLQEETCKTDRNQDDEFKELSQSATADAQDSNASKGGGSAEEEVTSDM
TLLWSDEEEDDVTPAGSSSPVFPEERPVRRTAADPETAGSECSWTSSRANKRASEPAAVH
YYWGVPFCPRGLDPDKYTQVIVAQMEVYEKSLKQAQRCLLRKAEWGEPVLPRPENYRSPE
SPAESPRPQTPQRLRRKKRHESADTSAEEEEEEKETDAENKEDEKNDGGDGADDCEVCPE
TQLSDVTKDRQDAEARPGSPALPEAHRILLGRSPAAGVQEEEEEEEEMEVGGAAAPSADA
AEWSGAVFSAPDPSETDGSWNAGRLEGERLEAEQLQRGAAGSAHMDCPLCQGSFPVTEIE
VHAAYCDGELDRSTAPLPSPHASKPRRKRARRAEATDDDADGSNQEKCYICQRAVPLRDY
SRHTELCIQRQAAKPAARGDLLSALERSEGGDSGAGPSRLQPGDVIDLRDDDDADADAAF
RTSDSPIRSFTPISEATDCLVDLRRPERSKKPSRRRR
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagaagagcgccggcattagtcactgagcaacaggccgcgatggctctgagg
gagcggcccgccggcgccggcgctcctcagcggctccaggctgagcaggcgcaggaggac
gctgctgtgggcgacgaggatgagttctcttcatccctgctgcctccagcatcggcgaga
gacagacgcaggcgagagaggggaaacaaatcaaaatgcaaagagatgtcagaggaggag
atgatggacctggctctgcgtctcagtgaacgggaagccactgtcactgcctccagactg
aagcaagaggaggaggctgtgatgaaagccatcaaggaaagtatggtcaatcagacaaaa
acagtcctgtcttcccaaagtcaaagtctgctcgctgatcaacatgctgatgcttctgcc
cgactctgctctccacggaaacccttgtactcaaatggaaagaagatctccgcgaacagc
gatgagggagaaaactgtccaacacagacaggagaagtaaaagctggagaggaaaataat
aaccgcaataaaaagtggaaaagggaaggaaggggttctctgccggagaagccagacctg
atgcagactcaggacgttgcctctcaggcttcaccctgcagctcggagtcggtctcacca
cagagttctgactcgactcagatcgacgactgtcccctccccaaatctcctgtcttcccc
ttgactggctgcagagccaccgtttgcatgtccaggctgagccaggatctgctggaaacc
tgcaaagtctctggatttgtgtcgtgctctcaggacagttggattcaaaagtctctcgtt
gaaggcaagagcccgacgtttccaaagagccccatgaacttcccagctggtcctaagagt
ccagtttacgacgggggagatgatggcgagcggatgagtccagatggtggtggaagtccg
gcttttggcagcactttgctgcaggatcagtctcaaagtgcctggaaacctcaagtttgc
aaaaattcagggtttacgttttcttctcaggagagtttcagcttcaccgggaggtcggcg
tcctgccggcccgacagcccggtattccccggaagccgacctgcagtcgaagcatcagcg
atctgcctaaaccccgttctctcagggtccggctctacgagcccagtgtacggctgcacg
gggcggcgccggacgcttgatcccattcagatgaactcgtctgtggttcctttgtctgca
gagctcagaggttctagtggggcagaaccatcacagagtctgcaggaggaaacatgcaaa
actgatcggaatcaggacgacgagtttaaagagctcagccaatcagcgactgctgatgct
caggacagtaacgcttccaaaggcggtggctcagctgaggaggaggtgaccagcgacatg
acgctgctctggtctgatgaggaggaggacgacgtcacgccggctggttcctccagccca
gtcttccctgaggagaggcccgttcgtcggactgcagctgatccagagacggccgggtcc
gagtgcagctggaccagcagtcgggcgaacaaacgggcatcagagcctgcagccgtccac
tactactggggcgttcccttctgtccacgaggcctggacccagacaaatacacacaggtg
attgtggctcagatggaggtctatgagaagagtctgaagcaggctcagcggtgtctgctg
agaaaggcggagtggggggagccggtcctgccacggccggagaattaccgttcacctgag
tcgccagctgaatcgcctcgacctcaaactccccagagacttcgaaggaagaaacggcat
gaatcagctgatacgtctgctgaggaagaggaggaggagaaggaaacggacgcagagaac
aaggaagacgagaagaacgatggaggcgacggcgctgacgactgtgaggtttgtccagag
acacaactgagcgacgtcaccaaagaccgacaagacgctgaggcgcggcctggaagtcct
gcgctgccggaggcccacaggattcttctaggtcgttccccggctgcaggtgttcaggag
gaggaggaggaggaggaggagatggaggtgggtggagcggctgcaccttcagctgacgcc
gccgagtggtcgggagctgtgttttcagccccggatcccagcgagacggacgggagctgg
aacgctggccgtttggaaggggagcgcttggaggcggagcagctccagcggggcgcggca
ggctccgcccacatggactgccccctctgccagggctccttccccgtcacggagatcgag
gtccacgccgcctactgcgacggggagctggaccggagcacggcgccgctcccctctcca
cacgcctcgaagccgcgtagaaaacgagcgcgacgagcagaggcgacggacgacgacgcg
gacggcagcaaccaggagaaatgctacatttgtcagagagcagttcctctgagagactac
agccgccacacggagctctgcatccagcgacaggcagcgaagcccgcggccagaggagac
ctgctgtcggcgctggagcgaagcgaaggcggggactcaggtgctggtccgtccagactc
cagccaggagacgtcatcgacctgcgggacgacgacgacgccgacgccgacgccgccttc
aggaccagtgactctcccatcaggtccttcacgcccatctctgaagccaccgactgcctc
gtggacttgaggagaccggagcgaagcaagaagccgagcagacgacggaggtga
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