Betta splendens (Siamese fighting fish): 114869544
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Entry
114869544 CDS
T08231
Symbol
smfn
Name
(RefSeq) small fragment nuclease isoform X2
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114869544 (smfn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114869544 (smfn)
03009 Ribosome biogenesis [BR:
bspl03009
]
114869544 (smfn)
Messenger RNA biogenesis [BR:
bspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
114869544 (smfn)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
Pre-60S particles
RNases
114869544 (smfn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
114869544
NCBI-ProteinID:
XP_029029688
UniProt:
A0A6P7PHU4
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Position
14:complement(13455185..13466624)
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AA seq
243 aa
AA seq
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MTGLDIERDQIIEMACIITDSDLNILAEGPNLIINQPDELLDGMSEWCKEHHGKSGLTQA
VKDSQITLEHAQYEFLSFVRQHTPPGQCHLAGNSVHADKRFLEKYMPQLMHHFHYRIIDV
STIKELCRWTSTLSSHGLSWSTGQAASYCSRRPGRLYSSRTRLCYWTIFICCERIGRRTA
AVVSRRIQNGASEKSCPQVYHKKALDDILESIKELQYYRVTIFKPTTDEKKGNIAEKCGS
NRS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtttggacattgagagagaccagattattgaaatggcatgcatcatcacagac
tctgacctcaacattttggctgaggggcccaacttgataattaaccaaccagatgagttg
ctggatggcatgtcagagtggtgtaaagagcatcatggaaagtcaggactaacccaggct
gtaaaggacagtcaaattacactggagcatgcacaatatgagttcctgtcatttgtgagg
cagcacaccccaccaggacaatgccaccttgctggcaactctgtgcatgcagacaaaagg
ttcctggaaaagtatatgccacagttaatgcatcattttcactacagaatcattgacgtc
agcactataaaggaactctgcagatggacaagcacgctgagctcacatggcctcagctgg
agtacaggacaagcagcgtcctactgttcacggagacctggccgactttactcatcccgg
actcgactgtgttactggacaattttcatctgctgcgagcggataggacggaggacagcg
gcggtggtttccagaagaatacaaaatggcgcctcagaaaaaagctgtccacaggtatac
cataagaaagccttggatgacatcttggagagtattaaggaactgcaatactacagagtc
accattttcaaaccaacaacagatgaaaagaagggcaacattgcagaaaagtgtggcagc
aacaggagctag
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