Betta splendens (Siamese fighting fish): 114869968
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Entry
114869968 CDS
T08231
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bspl03009
]
114869968 (ddx52)
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114869968 (ddx52)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
90S particles
Helicases
114869968 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
DUF2415
Motif
Other DBs
NCBI-GeneID:
114869968
NCBI-ProteinID:
XP_029030362
UniProt:
A0A6P7PC47
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All DBs
Position
14:8822187..8826228
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AA seq
662 aa
AA seq
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MDALELFRKLGAGAKFDLKRFGQDAARFKLCRSHDLEATSDPLSAIDYFGTSRASEAQSR
GTSKEEENDGGGQQLEDSEDSGSGGKRKRKDRERIARKKKTTNDQTEVEGDQTLKSKGNG
ITWTSSFDRKITNLPNDEKEKNSLKRLKHLHQEKVNRIRSRNRINVHGCDVPDPVCTFDE
LQSEYRLNPRVIQNLKDAGLNSPTPIQMQAIPLMMHGREVLACAPTGSGKTLAFCLPLLS
HLQQPANLGFRAVIISPTRELASQTYRELLRLSEGVGFRVHIIDKASLAAKKYGPQSNKK
YDILVSTPNRLIFLLNQDPPALDLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSGP
KVRRAFFSATCTPDVEKWCRLNLDNLVSVNIGHRNAAVDTVEQELLFVGTENGKLLAMRD
IIKKGFLPPMLVFVQSKERARELFHELVYEGINVDVIHAERTQQQRDNVVASFRAGKIWV
LICTALLARGIDFKGVNFVLNYDFPGSAVDYIHRIGRTGRAGHQGKAITFFTENDKPLLR
SIANVIKQAGCPVPEYMVDLKKTRSKDKRKLEKKPPKRNSICTTPRYLMKKGKAPKKGQK
KAGSGKQKREEAPQTPTQKLKDKKSTKQKKRDTAQKEEGTEKRTKIAKLKKKKGKKNIQQ
QQ
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggacgctctcgagttgtttcggaaactcggagctggagctaaatttgacctgaaaagg
tttggtcaagatgccgctcggtttaagctatgcagatctcatgatttggaagcaacctca
gatcctttatctgcgatcgattacttcgggacaagtcgagccagcgaagcccagagcagg
ggcacaagtaaggaggaggaaaatgatggaggaggacagcagcttgaggacagtgaagac
tctggttctggggggaaaaggaagcgaaaggatcgagaaagaatagcaagaaagaagaag
acaacaaacgatcagacggaggtggaaggtgaccaaacactgaaaagcaaaggaaatggc
atcacttggacatcctcattcgacagaaagattacaaacctgccaaatgatgaaaaggag
aaaaattcactgaagagactgaagcatcttcatcaagaaaaggtgaatcgtatccgatct
cgaaaccgtataaatgtgcatggctgtgatgtcccagacccagtgtgcacatttgatgaa
ctgcagtcagagtatcgcctcaatccacgtgtcattcagaacctcaaggatgcagggctg
aattccccaacacccatacagatgcaggcaatccctctcatgatgcatggtcgagaggtc
ctggcttgtgctccgacaggatcaggaaagactttggctttttgcctcccactgctttct
cacctgcagcagccggccaacctgggatttagagctgtgatcatctctccaaccagagaa
ctggccagccagacctacagggagctgcttcgcctgtctgagggagtcggttttagagtt
cacatcatagacaaggcttccctggcagccaagaaatatggaccacaatcaaacaaaaaa
tatgatatactcgtcagcactccgaacagactcatctttcttctcaaccaggatcctcca
gctctcgacctcagcagtgtggagtggctagtggtcgatgagtccgataagctgtttgaa
gatggcaaaacaggcttcagggagcagctcgccacaatctttctggcctgttctggaccc
aaggtacgcagagctttcttcagtgccacctgcacaccggatgtggagaagtggtgccgt
ctgaaccttgacaacttggtgtctgtcaacatcggacacagaaatgctgcagttgacaca
gtggaacaggagctgttgtttgttgggacagagaacggcaaactactggccatgagagac
atcatcaagaaaggtttcctgccaccgatgctggtgtttgttcagtctaaagaacgagcg
cgggagctctttcatgagttggtctatgaaggcatcaacgtggatgtcatccacgcagag
cgcactcagcagcagagagacaatgtagttgctagcttccgcgctggtaagatttgggtg
ttgatctgcacagctctgctggccagaggaatcgacttcaaaggagttaactttgtgctg
aactacgacttccccggcagcgctgtggactacatccacaggattggacgtactggtaga
gctggacatcagggaaaggccatcacctttttcacagaaaatgacaaaccactgctgcgc
agcatcgctaatgttataaaacaagctggatgtcctgttcctgaatacatggttgactta
aagaagactcgcagcaaagacaagcggaaacttgagaagaaacctcctaagagaaactcc
atctgcacaactcctcgctacttgatgaagaaaggcaaagcaccaaaaaaagggcagaag
aaggcagggagtggaaagcagaagagagaagaagcgcctcaaacgccaacacagaaactg
aaggataaaaagtcgacaaaacagaagaaaagagatacagcacagaaagaagagggaaca
gaaaaacgtacaaagatagcaaagttaaaaaagaaaaaggggaagaaaaatattcaacaa
caacaatag
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