Betta splendens (Siamese fighting fish): 114870271
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Entry
114870271 CDS
T08231
Symbol
si:ch211-79m20.1
Name
(RefSeq) PHD finger protein rhinoceros isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04010
MAPK signaling pathway
bspl04020
Calcium signaling pathway
bspl04510
Focal adhesion
bspl04518
Integrin signaling
bspl04540
Gap junction
bspl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114870271 (si:ch211-79m20.1)
04020 Calcium signaling pathway
114870271 (si:ch211-79m20.1)
09133 Signaling molecules and interaction
04518 Integrin signaling
114870271 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114870271 (si:ch211-79m20.1)
04540 Gap junction
114870271 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
114870271 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
bspl04052
]
114870271 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
bspl00536
]
114870271 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
bspl04052
]
Cytokines
Growth factors (RTK binding)
114870271 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
bspl00536
]
Heparan sulfate / Heparin
Growth factors/receptors
114870271 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
114870271
NCBI-ProteinID:
XP_029030649
UniProt:
A0A6P7PXQ0
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All DBs
Position
1:2733085..2740560
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AA seq
522 aa
AA seq
DB search
MRSWVLLLLVAAFTAARLRLGSAESEPLPPSLVDLVRNSPISSVDELKLLLQQETNAVVE
EEEDEHDIHSNITHGRFARSLVEAQPAQQAACKVRTEVMEVTRSMLDRRNANFMLWPPCV
EVQRCSGCCNTRLLQCVATVTASRYLQVIKIQYINRKAHYDKAIISVEDHVSCRCQAASS
SSPSSSSSSLPITHSSIQSNPNPPVAPPQHTPSSPHLPLPRPAPPAPPKPPTSKADLHRH
DDLKHNQQHEPVSRQWQQGSYTQLVHWTQPRPHPATTHVQSGGFGSISSWPSEARAAHSI
MGSPQQVGHGSGFDGSREEKSSREVHHPDHAQRQQQLLQHQQRQRYHGGAEGRELRTQYQ
LSAPQADSASPAGSPTQQPQPQPNPSEQKDSVTSHRQTELVSHKAAAEGEESGSAGSRGS
AGGEPVSGGRETDSKLTCGDGQLSDEERRQKLLQMVQREPDTRLHPRHRQQRPKPTAFET
AASTVGPLSPSAHKAPFHPASPRRRRKHRRRISKAAMRAMIM
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctgggtgctgctgctgctcgtggcggcgttcacagcggcccgtctgcgtctg
ggcagcgctgagagcgaacctctccctccgtcgctggtcgacctggtgaggaactctccc
atctcctccgtggacgagctgaagctgctgctgcagcaggagaccaacgcagtagtagaa
gaggaagaagacgagcacgatattcactcaaacatcacccacggccgcttcgctcggagc
ctcgtggaggcccagcccgcccagcaggcggcctgtaaggtccgcaccgaggtgatggag
gtgaccaggtccatgctggaccgccgcaacgccaacttcatgctgtggccgccctgtgtg
gaggtgcagaggtgctccggctgctgcaacacgaggctgctgcagtgcgtcgccacggtg
acggccagtagatacctgcaggtgataaagatccagtacataaacaggaaagcccactac
gacaaagccatcatctccgtggaagaccacgtcagctgtaggtgtcaagcagcctcatct
tcctctccctcctcctcctcctcatctctccccatcactcactcctccattcagagcaac
cccaacccccctgtggctccaccacagcacacgccctcgtcgccccaccttcctctccct
cgccccgctccgcccgctccgcccaagcctcccacctccaaggccgaccttcatcgacac
gatgacttgaagcacaaccagcagcacgagccggtgtccaggcagtggcagcagggcagc
tacacccagctggtgcactggacgcagcccaggccgcacccagcgaccacgcatgtgcag
tcaggggggttcggctccattagcagctggccatcggaggccagggcggcgcatagcatc
atgggaagcccccagcaggtcgggcatgggagcgggtttgatgggagcagagaggagaag
agcagccgggaggtgcatcacccggaccacgctcagcggcagcagcagttgttgcagcat
cagcagaggcagcgctatcacggaggagcagagggccgagagctgaggacccagtaccag
ctcagcgcgcctcaggcagacagcgcctcccccgctggcagcccaacccagcagccccaa
ccacagccgaaccccagcgaacagaaagactctgtgaccagccacagacagaccgagctg
gtcagtcacaaagcggcggccgagggggaggagagcgggtccgccggcagcagggggtcg
gccgggggggagccggtcagtggggggagggaaacggactctaaactcacctgtggtgac
ggtcaattgagcgacgaggagaggaggcagaaactcctgcagatggtacagagggagcca
gacacgcgcctccacccgcgtcatcggcagcaaaggccgaagccgaccgccttcgaaaca
gccgcctccacggtgggtcccctctccccgtcagcccataaggccccgtttcacccggcg
tcgcctcgtcgcaggaggaagcaccgcagacgcatcagcaaagcagccatgagagccatg
atcatgtag
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