Betta splendens (Siamese fighting fish): 114870413
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Entry
114870413 CDS
T08231
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X3
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114870413 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bspl04131
]
114870413 (vps8)
Membrane trafficking [BR:
bspl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114870413 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Clathrin
zf-RING_Vps41
zf-RING_UBOX
TPR_VPS8_2
zf-RING_11
zf_RING_Vps8_fungal
Beta-prop_WDR5
zf-RING_5
zf-RING_2
Beta-prop_THOC3
Beta-prop_EML_2
WDR55
EIF3I
zf-C3HC4
Beta-prop_WDR3_1st
zf-rbx1
Prok-RING_4
Beta-prop_NWD2_C
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
114870413
NCBI-ProteinID:
XP_029030796
UniProt:
A0A6P7PF54
LinkDB
All DBs
Position
15:complement(3237610..3319948)
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AA seq
1398 aa
AA seq
DB search
MSDSPDVRSLVSASSQLSLMEVDTIDDKEFDIPQVDTPPTLESILNKLEDEEEPFLLEDT
CILNTDNIDAHSCDTSSLASSDSGDPAHLKRHEHTKIKRRTMDLNTTVHGSVLRHNLLKG
ISAQIVSAADKVDAGLPTAITMSGVIAVGTSHGLALVFDTNQALRLCLGTKMTGAEFGAV
SAISINQDCSRLLCGFAKGQITMWDLATGKLLRTITDAHPPGTAILHVKFTDDPTLAVCN
DSGGSVFELAFRRVMGMRSCESRCLFSGSKGEVCCIEPLHALPDFKDHPITLYSLLAMAS
LTKILVIGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVPVQKMVNPILAFCKGDTVHFLLV
KREEEGTIHVIKQRQLHLSCDIISLSWINSRTLVLVDSHEKLQVVDRPSQEILETLDLEQ
VQLVYNSRHFKSLATGGNVSQALALVGEKACYQSVSSYSGQIVYLGTKWAHIMTLRNWRE
RIDCMLKQEHFVEALALAWSFHEGTAKAVVGLYGDPHKRKVVVVDKMVEILFQYTEHALK
KCPEQGKIQVMEQHFYDVVPVLVDYCLLLQKADLLFNQLYDRLVENAVANAVFLESLESY
IVTDRLCHLTAPIMRDLLAHYHENGMMDSLERCIVHLDVTNLDIQQVIQVCWDNHLYDAM
IYVFNSGMNDYITPMEKLFHVIGPPLREGRSLTNEEVVMGNKLLVYISCCLAGRAYPLGD
IPEDLVVQVKNQVFEFLIHLHSANSSEEEEVFPFIRTVLHFDTREFLNVLAMTFEDFKND
KQALEYQQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKQDNTLFVNRKLFDQVLEF
LCCPDDDSRQTERQQVLLELLQVGGVVKLNEERLLSLAEKAKFYQICEFLYEKKNMHDKI
IDCYLQDPLRKVEIFSYIHNLLSMPGYSPEEKQAVKNKALQHITELVTIAPSKSADLVMF
HFTKEVQQLIAELQDDQLLFRFLSCLLEPQERHHSGAILLQEHDLHELLLDLMCRFSPEQ
LLNFLQASHHYRLEEAIEITQKYHLNESTAYLLERKGDIHGAFALLLETLRDNLCVLTAE
GGTNEEKNCKTVTTVESSLNDIIALCYRSSQNLNQQQREVLWFPILETMMASEKQVKGSK
HTSELLKELTMKILNCMSGFISLPAVIQRLLLDPVYGKGKLAEIQNLILGMLDTFNYEQT
LLETTTTLLNHDLHWSLAHLRAAVTRGLHPRQDYCNICLQQYRRRQTSPEEIIVFSCGHL
YHFQCLQQKDYGWGCSLVQQQQWSCYKCSSSHGGRSGPAAEAKRGSSRSLAQTCVTSVQP
DTGAETGRKKVFVEGSLDLQQEQSWDQLRSLYRGPSRLSILSELSHSHSSGMKELLLFSQ
PVADNLKLKLSPPPLLEE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactctcccgacgttcgtagcctggtatctgcttcctcccagcttagcctgatg
gaagtggacacgattgatgataaggagtttgacattcctcaagtggacacgcctcccaca
ctagagagtatccttaataagctggaggatgaagaggaaccatttcttctggaggacacc
tgcatactaaacacagacaacattgatgcccactcatgtgatacgtcctctttggccagc
tctgatagcggagacccagcacaccttaaacggcatgaacacacaaagataaagcgaaga
acaatggatctgaacacaacagttcatgggtctgtccttcgacacaacctgctgaagggc
atctctgcacagatagtctctgctgctgataaagtagatgccgggctgccaactgctata
acaatgtcaggtgtgattgctgttggaacttctcatggtctggctttggtctttgatacc
aatcaggctttgcgtctctgcctgggcaccaagatgacgggggcagagtttggggctgta
tcagccatcagtatcaaccaagattgctcaagacttctctgtgggtttgctaaaggacag
ataacaatgtgggatttagctactgggaagcttttgagaaccatcactgatgcccaccct
ccagggacagccatactgcatgtgaagttcacagatgatccaactcttgctgtgtgcaat
gacagtggaggatcagttttcgagctggccttcaggagggtgatggggatgcgctcctgt
gaatcacgatgtctctttagtggttctaaaggggaggtgtgctgcattgaaccgctgcat
gctctccctgacttcaaagaccatcccataacgctttactctctgctggccatggcctct
ctcactaagattctggtaattggactaaagccctccctcaaagtctggatgacatttccc
tacagcaagtctgatccatccagtgttcctcagctggcctggcagtttgttcctgttcag
aagatggtcaacccaatcttggctttttgcaaaggagatacagttcacttcctcctggta
aaaagggaggaagagggcaccatccatgtcatcaaacaaagacaactccacctcagctgt
gacatcatcagcctaagttggattaacagtcgcacactggtcctggtagacagccatgaa
aaattgcaggttgtggaccggcccagtcaggagattttggagactctggacttggagcaa
gtgcaattggtttataacagtcgacatttcaaatcactggcaaccggaggaaatgtatcc
caggctctggctttagttggtgaaaaggcctgctaccaatcagtgtcaagctattcagga
cagattgtctatctgggcaccaaatgggctcacattatgactctaaggaactggagagag
cgtatagactgtatgctgaagcaagaacattttgttgaggccctcgctttagcctggtct
tttcatgaaggaactgctaaagcggtagttggtttgtatggtgatccacataaaaggaag
gttgtggtagtggacaagatggtagagatacttttccagtacacagagcatgctttaaag
aagtgtccagaacaaggcaagatccaagtgatggagcagcatttctatgatgttgttcca
gtgctggtggattactgcctactgctgcaaaaagctgacctgctgttcaaccagttgtat
gatcggctggtggagaatgctgttgccaatgccgtcttcctagagtccttggagtcgtac
attgttacagaccgtctttgtcacctcactgcacccatcatgagggaccttttggcccat
taccatgaaaatgggatgatggacagtctggaaagatgcatagtccacctagatgttact
aacctggacatacagcaggtgattcaagtatgttgggataatcatctctatgatgcaatg
atctacgttttcaacagtggcatgaatgattacatcacacctatggagaaactctttcat
gtgattggaccaccacttagagaggggaggagcctaacaaatgaggaagtggtgatggga
aacaaactgcttgtgtacataagctgttgtcttgcaggaagggcatatccactaggagac
attccagaagatcttgttgttcaagtcaaaaatcaggtgtttgagttcctgatccatctc
cattcagccaactcgtcagaggaagaggaggtttttccattcattcgtactgtcctccac
tttgacacaagggagtttctcaatgtcctcgctatgacatttgaagattttaagaatgac
aagcaggcacttgagtaccagcagaggatagtggacatcttacttcaagtgatggtggac
aacccagactttactccctcccaggtgggaggtctctttacctttttggctcgacagttg
gccaagcaggacaacacactttttgtgaacaggaagctctttgatcaggttctggagttc
ctgtgttgtccagatgatgactcccgacaaactgagagacagcaggttcttctggaactg
ctgcaggttgggggagtagtcaagttaaatgaagaaaggctgttatctctagcagagaag
gccaagttctaccaaatctgtgaatttctatatgagaagaaaaacatgcatgacaagata
attgactgttaccttcaggatcctctcagaaaggtggagatctttagctacattcacaac
ctgctgtccatgcctggctacagtcctgaggagaaacaagcagtcaagaataaagcactt
cagcacataacggaattagtgaccattgcccccagcaagtcagctgacctagtcatgttt
cacttcactaaagaggtgcagcagctcatcgctgagcttcaggatgaccagctactcttt
cggttcctcagctgcctcctggagccacaagagagacatcattcaggagctatcctcctt
caggaacatgacctccatgagcttctgctggatttaatgtgccgattttctcctgaacag
cttcttaactttctccaggcctcccaccactacaggctggaggaagctatagagatcaca
caaaagtaccatctgaatgagtccacagcctatctgctggagaggaagggagatatccat
ggagcatttgccctcttgttagagacattgagagacaatctgtgtgtcctaacagctgaa
ggtgggacaaatgaggagaaaaactgcaaaacagtgaccacagtggagtcgtcactgaat
gacattattgctctgtgttatcgaagttctcagaaccttaatcaacagcaaagagaggtt
ctctggtttccaatactggagaccatgatggcttctgagaaacaagtaaaagggtccaag
cacacatcggagttattaaaagagctgacaatgaagattctcaactgtatgagtggcttt
atctctcttcccgctgttatccagcggttattgctggacccagtgtatgggaaaggaaag
ctggctgagattcaaaatcttatcctgggcatgctggacacttttaactatgaacagacc
ttacttgaaactacaaccactctgttaaaccatgatctccattggtctctggcccatctg
cgcgctgctgttacaagaggactgcatcctagacaagactactgtaatatctgcctccag
cagtataggagaaggcagacttctcctgaggagatcattgtgttcagctgcggtcacctg
taccatttccagtgcctgcagcagaaggactatgggtggggctgttctttagtgcaacaa
cagcagtggagctgctacaagtgttcttctagccatggagggaggagtggccctgctgca
gaagcgaaacggggcagcagcaggtctctagcacagacttgtgttacatcagtccagccc
gacacaggagcagagacgggcagaaagaaggtgtttgtcgagggatcactggaccttcag
caggaacagtcctgggatcaattgcgaagtttatacagaggaccatccagactgtcaata
ctttcagaactgtcccacagccacagcagtggcatgaaagaactgttactcttctctcag
cctgtggcagataatttgaaactcaaactctctcctccacccttgctagaggagtag
DBGET
integrated database retrieval system
