Betta splendens (Siamese fighting fish): 114870774
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Entry
114870774 CDS
T08231
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114870774 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bspl03041
]
114870774 (dhx15)
03009 Ribosome biogenesis [BR:
bspl03009
]
114870774 (dhx15)
Enzymes [BR:
bspl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114870774 (dhx15)
Spliceosome [BR:
bspl03041
]
Complex A
U2 snRNP components
U2 related factors
114870774 (dhx15)
Complex B
114870774 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
114870774 (dhx15)
Ribosome biogenesis [BR:
bspl03009
]
Eukaryotic type
90S particles
Helicases
114870774 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
nSTAND3
SRP54
AAA_29
AAA_25
AAA_7
Motif
Other DBs
NCBI-GeneID:
114870774
NCBI-ProteinID:
XP_029031675
EnsemblRapid:
ENSBSLG00000018041
UniProt:
A0A6P7PZ15
LinkDB
All DBs
Position
2:complement(25364933..25387017)
Genome browser
AA seq
756 aa
AA seq
DB search
MSKRHRLDLGDEYSSKRKSSDGRDRDRDRDEHFKDRNRDRDRDRARDRDVKPSGTPNIFA
SGIGSFLKQPSAQQQINPFTNLPHTPRYYEILKKRLQLPVWEYRERFTDILMKNQSFVLV
GETGSGKTTQIPQWCVDMVRSTPGTRRAVACTQPRRVAAMSVAQRVADEMDVVLGQEVGY
SIRFEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEV
VRQRADLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTV
MQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQR
IFEPPPPNKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVT
AISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGI
DDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASC
EFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHVDGDHLTLLNVYHAFKQNHE
STQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYINIRRALLTGFFT
QIAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPDWLV
KIAPQYYDMSNFPQCEAKRQLERIIAKLSSKEYTQY
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgtcatcggttagatttaggggatgagtattcaagcaaaaggaaatcttct
gatgggcgcgatcgggacagagaccgtgatgagcattttaaggacaggaaccgtgataga
gaccgagaccgtgccagagacagggatgtgaaaccatccggaacacccaacatctttgct
tcaggcattggaagcttcctcaaacaaccctctgcacagcagcaaatcaaccccttcacc
aacctgccccacacaccacgctactatgagatcctcaagaagcggctgcagctgcctgtc
tgggagtaccgagaaagattcactgacatcctgatgaagaaccagtcttttgtgttggtg
ggagagacaggctctgggaaaaccacacagatccctcagtggtgcgtggacatggtgcgt
tcaacaccgggcacaaggagagcagtggcctgcacccagccgaggagggtagcagccatg
agtgttgctcagagggtggctgatgagatggatgtcgtcctcgggcaggaggtcggctac
tccatcaggtttgaggactgcagctctgcaaagacagtactgaagtacatgactgatggt
atgttgctgcgtgaggccatgaatgatcctctgctcgagcgctacggcgtcatcatcctg
gatgaggcccacgaacgcacattagctacagacatcctcatgggagttctgaaggaggtg
gtccgtcagcgagcggatctcaaggtcatcgtcatgagtgccacgcttgatgctggtaag
ttccaagtgtacttcgatagctgcccactcctgaccatccctggacgcacgcaccctgtg
gaaatattctacacgccagaaccagagcgggactacctggaggcggccatcaggactgtg
atgcaaatccacatgtgtgaggaggatgaaggggatgttctgctgttcctcactggccaa
gaggaaatcgacgaagcttgcaaacgaatcaagagggaggttgacgacctggggcctgaa
gttggcgatatcaaaatcatcccgctgtactccacactgcctccacagcagcaacagagg
atcttcgagccacccccacccaataaaccaaatggtgccattggaaggaaggttgtcgtg
tcaacaaacatcgctgagacatccctgaccattgacggtgtggtgtttgtaatcgatcct
ggatttgccaagcaaaaggtctataacccacgtattagagtggaatcacttttggtgaca
gccatcagcaaggcctcagctcagcagagggcaggtcgcgccggaaggacacgtccagga
aaatgtttccgcctttatacagaaaaagcttacaagacggaaatgcaggacaacacgtat
cccgagatcctaaggtccaacctcggctctgtggtgctgcagctgaagaagctgggcatc
gatgacctggtgcactttgactttatggacccaccagccccagagaccctgatgcgagcc
ctggaattgctgaactacctggcagcgctcaatgacgacggtgacctgacagagctgggc
tccatgatggcagagttccccctggacccccagctggccaagatggtcattgccagctgt
gaattcaactgctcgaacgagatcctctccatcactgccatgttgtcagtcccacagtgc
ttcgtccgacccacggaggctaaaaaggcggcagacgagtccaagatgcgctttgcccat
gtcgacggcgaccacctgacgctgctgaacgtctaccacgccttcaagcagaaccacgag
tccacccagtggtgctatgacaacttcgtcaactaccggtcgctgatgtccgcagacaac
gtgcgccagcagctctccaggatcatggaccgcttcaacctgccgaggcggagcaccgag
ttcaccagcagagactattacatcaacatccgccgagcgctgctcaccggcttcttcacg
cagatcgctcacctggagcgcaccggccactacctgactgtaaaggacaaccaggtcgtc
cagctgcacccgtccactgtgctggaccacaagcctgagtgggtgctctacaacgagttt
gtgctcacaaccaagaactacatccgcacgtgcaccgacatcaagccagactggctggtg
aaaattgccccgcagtactatgacatgagtaacttcccccagtgtgaggcaaagaggcag
ctggagcgtatcattgcgaaactctcctcaaaggaatacacgcagtactga
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