Betta splendens (Siamese fighting fish): 114870796
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Entry
114870796 CDS
T08231
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bspl
Betta splendens (Siamese fighting fish)
Pathway
bspl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114870796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspl03019
]
114870796
03016 Transfer RNA biogenesis [BR:
bspl03016
]
114870796
Enzymes [BR:
bspl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
114870796
Messenger RNA biogenesis [BR:
bspl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
114870796
Transfer RNA biogenesis [BR:
bspl03016
]
Prokaryotic type
tRNA degradation factors
114870796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
Motif
Other DBs
NCBI-GeneID:
114870796
NCBI-ProteinID:
XP_029031714
EnsemblRapid:
ENSBSLG00000025294
UniProt:
A0A6P7Q6C4
LinkDB
All DBs
Position
15:complement(15702347..15708379)
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AA seq
770 aa
AA seq
DB search
MRYLLSLGRSFVRLHVRLCHQSVYSSHATPRRVGVDLGKKKLEISSGRFARFADGSAVVQ
LGETSVMVTAVSKTKPSPSNFMPLVVDYRQKAAAAGRIPTNYLRRELGTTDNEILTSRLI
DRSIRPLFPPGYFYDTQILCNLLSVDGANDPDVLAINAASAALALSDIPWYGPIGAVRVG
LVDGEMLINPTRAQMTSSTLNLIVAGGPSSQVVMIEASAENILQQDFCHAVKLGIKHTQQ
IIQAIQQLTREQKVIKRTPVKIFSAPSDMVEHVRQSASEKIYGVFTDYTHDKISRDEAIN
GIRLETEEGLKEKFPQADPFEVIESFNTVSKEIFRNLVLNEYRRCDGRELTALRNIACDV
DLFKPLHGSALFQRGQTQVLCSVTFDSLESSIKADIITTALSGIKDKNFMLHYEFPPYAT
NEIGKMGGLNRRELGHGALAEKALRPVIPKDFPFTIRVTSEVLESNGSSSMASACGGSLA
LMDAGVPISSAVAGVAIGLISKADPEKPAEILDYRLLTDILGIEDYLGDMDFKLAGTSKG
ITALQADVKIPGLPLKVVMEAIKQATVAKREILGIMNKCMAKPREARKENGPVVETVRVP
VSRRARFFGPGGYNLRRLQAQTGVTISQVDEETFSIFAPTPGAMNEAQDFITEICKDDQE
QQLEFGAIYTATITEIRDIGVMVKLYPNMSAVLLHNSQLDHKRITHPSALGLEVGQQIQV
KYFGRDPTDGRMRLSRKVLQSPAATLVKTLSEKQSMSMGSVNSHGTSTEL
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggtacttgctcagtctggggcgctcgtttgtccgccttcatgtccgtctgtgtcac
cagagcgtctacagcagccatgctactccacgcagagtgggagtggaccttggtaaaaaa
aagcttgagatctcttcagggaggtttgccaggtttgcagatggatctgctgttgtacag
ctcggtgaaacctctgtgatggtgactgctgtgagcaaaaccaaaccatctccttccaac
ttcatgcctttggtggtggactacagacagaaagcagccgctgctggacggatccccacc
aactacttaaggcgagagctgggcaccaccgacaatgagatcctcaccagcaggctcata
gacagatctatcagaccactcttccctcccggctacttttatgacactcagatcctctgt
aacctgctgtcagttgacggtgctaatgatccagatgtgctagctattaatgcagcatct
gctgctctggccctgtctgacatcccctggtacggacccataggtgctgtgcgtgtgggc
ttggtagatggagagatgctaatcaaccccaccagggcacaaatgacttccagcactctt
aacctgattgtggctggaggccccagcagtcaagtggtgatgatcgaggcttcagctgag
aacatactgcagcaggacttttgccatgcagtgaagttgggaataaaacacactcagcag
atcatacaggccatccagcagctgacacgggagcaaaaagtcatcaagcgcacaccggtg
aagattttctcagccccaagtgacatggtggaacatgttcgacaatcagcatctgagaag
atttatggtgttttcacagattacactcatgataagatttccagagatgaagctattaat
ggaattcgactagaaactgaggagggactgaaagaaaaattcccacaggctgacccattt
gaagtaattgaatccttcaacactgtgagcaaagaaatcttccgcaatttagtgcttaac
gagtacaggaggtgtgatgggagagagttgactgctttaaggaacattgcttgtgatgtt
gacctctttaaacctctgcatggctcagctctctttcagagaggacagacgcaggtgctg
tgcagtgtcacatttgattccctggaatccagtatcaaagcggatattatcaccactgct
ttaagtggtattaaggacaaaaacttcatgctgcattatgaattcccaccatatgcaacc
aatgagattggaaagatgggaggcctcaacaggagagaacttggtcacggggccctggct
gagaaggctctgagacccgtcatacctaaagacttccctttcactatcagggtcacttca
gaggtgttggagtcaaacggatcttcctcaatggcttcggcatgtggagggagccttgcc
ctgatggatgcaggtgtccccatctcttctgctgtggctggtgtagcaattggcctcatc
tccaaagccgacccagagaaacctgctgagatccttgactaccgattactaacagatata
ctgggaatcgaggattaccttggggacatggatttcaaattggcaggaacaagcaaaggc
atcactgctctacaggctgatgtgaagataccaggtttgcctctgaaggtggtaatggag
gctatcaaacaggccacagtggcaaagagagaaatcttgggcatcatgaacaaatgtatg
gccaaacccagagaagctcgaaaagagaacgggcctgttgttgaaactgtccgggtgcct
gtttccagaagagcccgcttttttggtcctgggggatataatcttcgcaggctacaagct
cagacgggagtaacaataagtcaggtggacgaggaaaccttctctatattcgctcccaca
ccaggagcaatgaacgaagcgcaagacttcatcactgagatctgcaaagatgatcaagaa
caacagctggagtttggtgccatctatacagccacaataactgaaataagggacattggt
gtaatggtgaaactttacccaaacatgagtgctgtcctgctacacaactcacaactggac
cacaaacggattacacatccaagtgctttggggttagaagtgggacagcagatacaggtt
aagtactttggacgggacccgacagatggcagaatgaggctttcacgaaaagtgctgcag
tctcctgcagcaactcttgtcaagacgctgagtgagaaacagagcatgtccatgggttca
gtcaacagccacggcaccagcactgaattgtga
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