Betta splendens (Siamese fighting fish): 129602904
Help
Entry
129602904 CDS
T08231
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
bspl
Betta splendens (Siamese fighting fish)
Brite
KEGG Orthology (KO) [BR:
bspl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bspl03021
]
129602904 (scaf8)
03041 Spliceosome [BR:
bspl03041
]
129602904 (scaf8)
Transcription machinery [BR:
bspl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129602904 (scaf8)
Spliceosome [BR:
bspl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129602904 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129602904
NCBI-ProteinID:
XP_055361887
UniProt:
A0A9W2XJI0
LinkDB
All DBs
Position
22:complement(10725176..10744319)
Genome browser
AA seq
1417 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIPTFQHLYRCPPDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGIPPPSVTPVMPTSAAPVNNTTPGTPATPATPANIVQGLPDWAS
QITNRDTVAAVAQILQSPQGQQLQQLVQSLQMQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANTLNPLEQRVSSFNKKLLGPFDFGNDPERGDESKKDSSSSQLPMVSEPINSSLF
HQLAEQLQQQNLEQFQKQLLEHQQHQQKVMTIEGQDSIFGQENTIPTAQNSNQPQLPEPD
DKTDDSIDNQQQDMDLDEGPDGMEEEIFEAEEKKTVSTRSRTRSRSRSRSPKRRRSRSRS
GSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEYGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSFKIG
SKVIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKLDDLDGFAEGGIIDQETVNDEWE
AVKNAEPAKEATSQLVSADTTAASNSQAEMYTQQVTMMPVQLPVAQAVQSAVGLVPPTFP
VTMSIPPPGYGPPPPFIRAGFNASQPPPGFMQAAQTAGMAPTTTSLVQPTVASSQEAVKE
SPFNAMIPPTNTIAGSFMPSAIPGASVFSPVGVQTQQATNDKAVQSTEGMDAAAAAAAAV
AAELTLQGMQNAVRSGMGLLGMHPTASLTHSLHPSGLSGQRMPGLMPLDVRPNLLQPGAA
ARFPLLMQQGHTQQSAGLLDSSLQAQARARAPFPQLDPFNRASNLTNENLSKTEDESSSG
ADEGKDQDYRFPPVDKQSTGLLRTPPPEQRETLGSGSAAAGGNRPPLLQTPGAQPARTSL
VGRLQALAGFTPDNRWNQTRGDFDERDGMRGGPQTSSGPKGFREEHSTPGQTFPNRFDSR
PGTAGGAAGASGNTGAGGGPQAWNRSGGATAPFDSELHQDLDDRRRPWDRQRDRDERDFD
FRRDMNGNRHSRDRDRDRERERDRDRDRDRERERGRDRTRETERDRDRDKERDHERERER
ERGSWTPLLPLPTPLLPTPPLNPNLTLNQGKLLSPLKLNPQVQSRFQAPALPQAQAKTSL
LSLNQPLVPIKSPPSSQNQAAVPEPQSETPVAPETPQTQPSPMALSPDPSSDSKSQSPLT
EVLTRAESPDTPPETASPFADTKTPNQASPLVDSPCRDSPVAFTQAASPPAEAAYSLEEQ
ESTQKDEEESRSHSSPQPQWVNGSGMDNSIVAEPTPEASPEPSPDPSSGPALPENEQEEA
LQEQLASPEDVDSEQSEPMEDAASQPVVDTVTDTEGT
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcgtttaacaacgagctgtactcactgaatgagtacaagccgccg
atctccaaagccaagatgactcagatcaccaagtctggaatcaaggctataaaattctac
aagcatgttgtccagagtgtggagaagttcattcagaagtgcaagcccgaatacaaggtt
ccaggactatacgtcatcgactcgattgtcagacagtcacgtcaccagtttggcacagag
aaggatgtttttgccccacgcttcagcaagaacatcattccaacgttccagcacctctat
cgctgccctccagatgataagagtaaaatagttcgagtcctgaacctgtggcagaagaat
gcagtcttcaagagtgacatcatccagcctcttttggacatggccgcaggcattcctcct
cctagtgtcacacctgtcatgcctactagtgctgccccagtcaataacactactcctggc
acgccagccaccccggcgaccccagccaacattgtgcagggtctgcctgactgggcgtcc
cagattaccaatagggacactgtggctgcggtggcacaaatcctgcagagccctcaggga
caacagctccagcaactggtacagagtttgcagatgcagcagcagaagccccagccgtct
ctgctgcaggccttggatgccggcctggtcgtgcagttgcaggctctgacggctcagctc
acagctgctgctactgccaacacacttaaccccctagagcagagggtctcttcttttaat
aagaaactcctgggtccctttgactttggaaacgaccccgaacgtggagacgagtctaaa
aaggatagctcatcctctcagctgcctatggtgtctgagcccattaacagctcactcttc
catcagttggctgagcagctgcaacagcagaatctggagcagtttcaaaagcagctgcta
gagcaccagcagcatcagcagaaggttatgactatagaaggacaggactcgatctttggg
caggagaacaccattccaactgctcaaaacagtaaccagccacagcttcctgagccagac
gacaaaacagacgattctatagacaaccagcagcaggacatggatctggacgagggccca
gatggaatggaggaggagatctttgaagcagaagagaagaaaactgttagcacacggtcc
agaacacgctcgaggtcacgctctagatctccgaagaggagaaggtccaggtcccgctct
ggctcgcggaaacgtaaacatcgcaagcgatcgcgctctcgctctagagatcgcaagagg
aagtcttcgcggtcatactcaagcgaaagacgcgcccgagagcgagagaaggagcggcaa
aagaaaggacttcctcccatacggtctaaaacattaagtgtgtgcagcacaaccctgtgg
gtgggccaggtggacaaaaaggccacccagcaggacctgactaatctctttgaagaatat
ggccagattgagtccatcaatatgatccctcccagaggctgtgcctacatctgtatggtc
cacagacaggatgcctaccgcgcccgccagaagctcagcaccggctcttttaaaattggc
tccaaggttatcaagatcgcatgggccctaaacaagggggtgaagcaggagtacaaacag
ttttgggatgtggatttgggtgttacctacataccttgggagaaggtgaagctggatgac
ctggatggctttgctgaaggaggaatcattgatcaggagacggttaatgatgaatgggaa
gcggtcaagaatgctgagccagccaaggaagcaacgagtcagttagtaagcgctgacact
acagccgcgtcaaacagccaggctgagatgtacacgcagcaggtgaccatgatgcctgta
cagctaccagtggcccaggctgttcagagtgcagtagggctggtgcctcctaccttcccc
gtcaccatgagcatccccccaccaggctacgggccaccaccgcccttcatcagggctggc
tttaatgcctctcaacctccaccaggttttatgcaggcagcacagacagcaggcatggcc
ccaacaactacttctttagttcagccgaccgtggcctcaagccaagaagctgtcaaggaa
tcaccgttcaatgcgatgatccctccgaccaacacaattgctggcagtttcatgccctcg
gccatccccggagccagcgtgttcagcccagtgggagtccaaactcagcaagctaccaat
gacaaagcagtccagtctacagaaggaatggatgctgctgccgctgctgccgctgctgtt
gctgcagagctcacgctgcaaggtatgcagaatgcagtccgcagtggaatgggcctctta
ggcatgcatcctactgcctcactcacccactcgctgcatccttctggtctctctgggcaa
agaatgcctggtctgatgcctctagacgtgcgacccaacctcctccagcccggggctgct
gcgcgcttccccctcctcatgcagcagggccatacccagcaatctgctggtctcctcgac
agctccctccaggcgcaagctcgtgcaagggctccattcccacagctggaccccttcaac
cgggcttcaaaccttactaatgaaaatttatccaagaccgaagatgagtcgtcttctggt
gctgatgagggcaaagaccaggactaccgcttccccccagtggataagcaaagtactggc
ttgctgaggacacctccaccagagcagagggagacacttggaagcggtagtgcagcagca
ggagggaacagacctcctttgcttcagacaccaggggcacagccagccagaaccagcctg
gtgggacgtctgcaggccttggcaggtttcactccagataaccgctggaaccagaccaga
ggggatttcgatgaacgcgatggcatgcgaggaggtccacagacttctagtggtcctaaa
ggcttcagggaggagcactcgacacctgggcagaccttccccaatcgttttgacagccgc
ccgggaacagctggaggcgcagcaggggcttctgggaatacaggagcgggtggaggacca
caggcctggaaccgaagtggcggcgccaccgcaccttttgacagtgagttacatcaagac
ctagatgaccgaagacgaccatgggacaggcaaagagacagagatgaaagagattttgac
ttcaggagggacatgaatggtaatcgccacagcagagacagagaccgagaccgagagcgt
gagagggacagagacagagacagagacagagaaagggagcgaggccgagaccgcacaaga
gaaactgaacgtgacagggaccgtgacaaagagcgagatcacgagagggaacgtgaacgt
gaacgtggcagctggacacctctcctccctctgcccacacctctgcttccaactccacct
cttaatcccaatctgaccttgaaccaaggcaagctcctttcaccgcttaaattaaatcca
caggttcaatcccgattccaagccccggccctgcctcaagctcaagcgaagacctctctt
ttgagtctgaatcagccgctggtgccgatcaagtctccaccgtcatcgcagaaccaagca
gccgtgcctgagccccagtcagaaacgccagtcgcaccggagacacctcagactcagccg
tcgccgatggccctgtcgcctgacccctcatctgacagcaaaagtcagagtccgttaaca
gaggttctcactcgagctgagtcaccggacacacctccagaaacagcatcaccttttgca
gacactaagacaccaaaccaagcctcccccttggttgattccccatgccgagactcccct
gtggccttcacacaagctgccagcccccccgcggaggcagcgtactctctggaggagcag
gaaagcacacagaaggacgaagaggagtcacggagtcactcctcgccccaaccccagtgg
gtcaatgggtctggcatggacaatagtattgtggctgagcctacgcctgaagcctccccc
gagcctagtccagacccctcatctggtcccgcgctccctgaaaacgaacaagaggaggcg
cttcaggagcagcttgcctctcctgaggacgtagacagtgaacagagtgagccgatggag
gatgctgcgagtcagccagtggtagacactgtcacagacactgaggggacataa
DBGET
integrated database retrieval system
