Brevibacterium spongiae: L1F31_00025
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Entry
L1F31_00025 CDS
T09030
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bspo
Brevibacterium spongiae
Brite
KEGG Orthology (KO) [BR:
bspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bspo03032
]
L1F31_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
bspo03400
]
L1F31_00025 (gyrB)
Enzymes [BR:
bspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L1F31_00025 (gyrB)
DNA replication proteins [BR:
bspo03032
]
Prokaryotic type
DNA Topoisomerases
L1F31_00025 (gyrB)
DNA repair and recombination proteins [BR:
bspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L1F31_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UVI36095
UniProt:
A0ABY5SPM7
LinkDB
All DBs
Position
5297..7294
Genome browser
AA seq
665 aa
AA seq
DB search
MTTEDQPHYDAGDITVLEGLEAVRKRPGMYIGSTSERGLHHLVQEIVDNSVDEAMAGYCD
HIEVTILADGGVRVTDDGRGMPVAMHPTEGKPTVEVILTILHAGGKFGGGGYAVAGGLHG
VGSTVVNALSERLEVEVKRDGYVWNMDFVQGVPTGELQRGEVSDETGTTVTFWPDGSIFE
TTDFSYEYLRARFQQMAFLNKGLKISLTDERHNEVDDDDVQIDEDEADEWKPRTVTYRYE
HGLLDYVEYLNSSKKADLVHPDVIVFEAEEGEQMLSLEIAMQWTTSYNESVHTYANVINT
HEGGTHEEGFRTALTSLVNAYAKEQKLLREKDPNLTGDDIREGLTAVISVKLGDPQFEGQ
TKTKLGNSEVKGFVQRVVRDELGHWFESNPAQAKDVVRKALQASQARMAARKAREATRRK
GLLESSGMPGKLKDCQSKDPTISEVFIVEGDSAGGSATQGRNPNTQAILPLRGKILNVEK
ARLDRALGNNEVQAMITAFGTGIGEEFDLEKLRYHKIVLMADADVDGQHITTLLLTLIFR
YMKPLIEHGYVYLATPPLYRIKWSNAAHQFAYTDKERDGLLETGRAEGKRLPKDLAIQRY
KGLGEMNYEELWETTMDPDHRLLKQVSLDDAIVADEIFTVLMGDDVDSRRRFIQENAKDV
RFLDI
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgaggatcagcctcattatgatgccggcgacatcacggtactcgaaggtctc
gaggcagtccggaaacgacccggcatgtacatcggttcgacctcggaacgtggtctccac
cacctcgttcaggagatcgtcgacaactcggtcgacgaggcgatggccggctactgcgac
catatcgaggtcacgatcctcgccgacggcggtgtccgcgtcaccgacgacggccgcgga
atgcccgtggccatgcacccgaccgagggcaagccgaccgtcgaggtgatcctcacgatc
ctccacgccggcggtaagttcggcggcggcggctatgctgtggccggcggtctccacggt
gtgggttcgaccgtcgtcaacgcgctgtccgaacggctcgaggtcgaggtcaagcgcgac
ggctacgtgtggaacatggacttcgtccagggtgtgcccaccggcgaactgcagcgcggt
gaggtgagcgacgagaccgggacgaccgtgaccttctggcccgacggctcgatcttcgag
accacggacttctcctacgagtacctgcgtgcccgtttccagcagatggcctttctcaac
aagggcctgaagatcagcctcaccgacgaacgccacaacgaggtcgatgacgatgacgtc
cagatcgacgaggacgaggcagacgaatggaagccgcgcaccgtcacctaccgctacgag
cacggcctgctcgactacgtcgagtacctcaactcgtcgaagaaggctgatctcgtccac
cccgacgtcatcgtcttcgaagccgaagagggcgaacagatgctgtcgctcgagatcgcg
atgcagtggacgacgtcgtacaacgaatccgtccacacctatgcaaacgtcatcaacacc
cacgagggcggcactcacgaagagggcttccgcaccgcactgacctcgctggtcaacgcg
tatgcgaaggaacagaagctgctgcgcgagaaggacccgaacctcaccggcgacgacatc
cgcgagggcctgaccgcggtcatctccgtcaagctcggcgacccgcagttcgaagggcag
acgaagaccaagctcggcaactccgaggtcaagggattcgtccagcgcgtcgtgcgcgac
gaactcggccactggttcgagtcgaacccggcgcaggccaaggacgtcgtccgcaaggcc
ctgcaggcctcccaggccaggatggccgcacgcaaggcgcgagaagccacccgccgcaag
ggactgctcgagtcctcgggcatgcccggcaagctcaaggactgccagtcgaaggacccg
acgatctccgaggtgttcatcgtcgagggcgactcggccggcggctcggccacgcagggc
cgcaacccgaacacgcaggcgatcctgccgctgcgcggaaagatcctcaacgtcgagaag
gcccgtctcgaccgggcccttggcaacaatgaggtgcaggcgatgatcaccgccttcggc
accggcatcggtgaggaattcgacctcgagaagctccgctaccacaagatcgtcctcatg
gccgacgccgatgtcgacggtcagcacatcaccacactgctgctgactctgatcttccgg
tacatgaagccgctcatcgaacacggctacgtctacctcgccactccgccgctctaccgg
atcaagtggtcgaacgcagcacaccagttcgcctacacggacaaggaacgcgacggcctg
ctcgagaccggtcgggccgaaggcaagcgcctgcccaaggatctcgcgatccagcgctac
aagggtctgggcgagatgaactacgaggagctgtgggagacgacgatggacccggatcat
cgcctgctcaagcaggtctccctcgatgacgcgatcgtcgccgatgagatcttcacggtc
ctcatgggcgatgacgtggattcgcgtcgccggttcatccaggagaacgcgaaggacgtc
cgcttcctcgacatctga
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