Brevibacterium spongiae: L1F31_02905
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Entry
L1F31_02905 CDS
T09030
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bspo
Brevibacterium spongiae
Pathway
bspo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L1F31_02905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bspo03400
]
L1F31_02905
DNA repair and recombination proteins [BR:
bspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L1F31_02905
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1F31_02905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
SMC_N
AAA_21
AAA_29
Anti-TRAP
AAA_16
DnaJ_CXXCXGXG
AAA_15
AAA_25
RsgA_GTPase
DUF4350
AAA_33
ATPase
AAA_22
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UVI36635
LinkDB
All DBs
Position
complement(646444..648987)
Genome browser
AA seq
847 aa
AA seq
DB search
MSTQAQHLSPAASPAAAVEVRGARVHNLREIDIDVPLNTLVAIAGVSGSGKSSLAMGVLY
AEGSRRYIEALSTYTRRRMGQAARADVDSVRHIPAALALRQRPGVPGVRSTFGTSTELLN
VIRLMFSRLASHVCPNGHRQEPTLDVAAEEPFACPECGETVEAPGAEALAFNSGGACPRC
EGIGTISEVDDDSLIRDPNKSIDDGTVIPWQMFGFNVQPQIAREFGVRTDVPWSELEDWE
RDIVFAGPEEKKHITVTSKKGLHDLDFTFRNARLTVTEELKRADTEKRFARVSRFLSEQV
CPDCEGTRLSPAARAPRIGDLGLADATAMTLDEVVDWAAGVPGTLPTPMQPMARSLVDAL
LGMARRLLDLGLGYLGLDRAGSSLSTGERQRVQLSRAVRNETTGVLYVLDEPSIGLHPSN
IKGLQGVIADLLEEGNSVVMVDHDPLVLREADHLIEIGPGSGKDGGSVVAEGSVAELDAH
PDSRIGPYLTGRADALVRTPAPEAEIVDHGRIRLLTSPIHTVHALETEIPRKRLTVVTGV
SGSGKSTLVLDSLVPALKAEAAGDERAMPSHVRELEAGGIERVNVVDATPIGINVRSTVA
TYSGVLDDLRRAYARLDSAKDAGLTAGDFSYNTGSLRCPKCEGTGEITLDVQFLPDVDIP
CPECEGRRYSPDADEYCRPSDADGQLQSLPELLALTVTEALPHLTAMRKVHARLEALEDV
GLGYLTLHEATPALSGGEAQRLKLATELGKSQKHTLFVFDEPTVGLHPDDVRVLVGVFQQ
LLDQGGTVLVIEHDLDMIANADWIIDLGPGGGQDGGQIVATGTPGHVAETSDSVTGEYLR
GHLAETR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacccaagcacagcatctctcccctgccgcatcccctgcagcagcggtcgaagtc
cgtggcgcgcgcgtccataatctccgcgagatcgacatcgacgttccgctgaataccctc
gtcgccatcgccggagtctccggatccggcaagtcctcgctggccatgggcgtcctctac
gccgagggctcccgccgctacatcgaagccctatccacctacacccgccgacgcatggga
caggccgcccgcgccgacgtcgactcggtccgccacatccccgcagcgctggctctgcgg
cagcggcccggcgtgcccggagtccgttcgaccttcggcacctcgaccgagctgctcaac
gtcatccggctgatgttctcccggctggcctcccacgtctgcccgaacgggcaccggcag
gaaccgacgctcgacgtcgccgccgaagaacccttcgcctgcccggaatgcggtgagacc
gttgaagctcccggcgccgaggcgctggccttcaattccggtggagcgtgtccccgctgt
gagggcatcggcacgatcagtgaggtcgatgacgactccctcatccgcgacccgaacaag
tccatcgacgacggcaccgtcattccctggcagatgttcggcttcaacgtccagccccag
atcgcccgcgaattcggcgtccgcaccgatgtgccctggagcgagctcgaggactgggaa
cgcgacatcgtcttcgccggccccgaagagaagaagcacatcaccgtcacctcgaagaag
ggactgcacgacctcgacttcaccttccgcaacgcccgcctgacggtgaccgaagaactc
aaacgcgccgacactgagaagcggttcgcccgcgtcagccggttcctctccgaacaggtc
tgccccgactgcgaaggcacgcgtctctccccggcagcccgggcaccgcgcatcggcgat
ctcgggctggccgatgcgactgcgatgaccctggacgaagtcgtcgattgggcggcaggc
gttccaggcactctccccacgcccatgcagccgatggctcggtcgctggtggacgcactc
ctcggcatggctcgcaggctgctcgacctcggcctcggatacctcggcctcgaccgggcc
ggttcgtctctgtcgaccggtgaacgccaacgagtccaactctctcgtgccgtccggaat
gagaccaccggcgtcctctacgtcctcgacgaaccctcgatcggcctccacccctcgaac
atcaaaggcctgcagggtgtgatcgctgacctcctcgaggaggggaactccgtggtcatg
gtcgaccacgacccgctcgtcctccgcgaagccgaccatctcatcgaaatcggccccggc
tccggcaaggacggcggctcggtcgtggccgaaggcagcgtcgccgaactcgacgcacac
ccggactcccgcatcggtccctacctcaccggccgcgccgacgccctcgtacgcactccc
gcacccgaagccgagatcgtcgaccacggtcgcatccgactgctcacctcaccgatccac
accgtccacgccctggagaccgagatcccacgcaagcggctcaccgtcgtgaccggagtc
tcaggatcgggcaagagcacgcttgtcctcgacagtctcgtccccgcgctcaaggccgag
gccgccggggacgagcgtgcgatgccgtctcatgtgcgtgaactcgaagccggcgggatc
gaacgggtcaacgtcgtcgacgccaccccgatcggcatcaacgtccgctccaccgtggcg
acctattccggcgtgctcgatgaccttcgccgcgcctatgctcgactcgattccgcgaag
gatgccgggctgacggccggggacttctcctacaacacgggctcgctgcgctgcccgaaa
tgcgaaggcaccggcgagatcacgctcgatgtccagttcctccccgacgtcgacattccc
tgtcctgagtgcgaagggcgacgctacagtcccgacgcggacgagtactgccgcccttcg
gatgccgatggtcagctgcagtcgctgccggagctgttggcgctcaccgtcaccgaggcg
ctcccccacctcaccgcgatgcgcaaggtccatgcccggctggaagcattggaggacgtg
gggctcgggtatctcactcttcacgaggccactccggctctgtccggcggtgaggcccag
cgactcaagctcgccaccgaactcgggaaatcgcagaagcacacgctcttcgtcttcgac
gaaccgacggtggggctgcatcctgacgacgtccgtgtcctcgtcggagtcttccagcag
ctgctcgatcagggcgggacggtgctcgtcatcgaacacgacctcgacatgatcgccaat
gccgattggatcatcgacctcggacccggcggaggccaggacggagggcagatcgtggcg
acaggaacccctgggcacgtcgcggaaacctcagacagcgtgacaggtgagtacctcaga
ggtcatctggctgagacgaggtga
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