Brevibacterium spongiae: L1F31_10425
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Entry
L1F31_10425 CDS
T09030
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bspo
Brevibacterium spongiae
Pathway
bspo03030
DNA replication
bspo03430
Mismatch repair
bspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L1F31_10425 (holA)
03430 Mismatch repair
L1F31_10425 (holA)
03440 Homologous recombination
L1F31_10425 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bspo03032
]
L1F31_10425 (holA)
03400 DNA repair and recombination proteins [BR:
bspo03400
]
L1F31_10425 (holA)
Enzymes [BR:
bspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L1F31_10425 (holA)
DNA replication proteins [BR:
bspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L1F31_10425 (holA)
DNA repair and recombination proteins [BR:
bspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L1F31_10425 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delta2
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UVI34552
LinkDB
All DBs
Position
complement(2291874..2292857)
Genome browser
AA seq
327 aa
AA seq
DB search
MAVKKTLVPWSSAKPAPVVMISGSESVLVRMAKDRIVSATRKKDPEEIEFDAAGYQAGEL
AMAASPSLFSSAKLIIVDAVEKCSEDFLNDALAYLDEPNDDAVVLLLHGGGNRGAKLVKK
LDAAGFPRVDAAVLKNESDRAKFAQSRFKAAKRRIDEAGMAALMSALGSDLAELNAGVDQ
LIEDTEGTITAEIVDQYYGGRVEATGFKVADAAVSGDAKNALSLLRHALSTGSDPVPLVA
AVAMKLRGMAKVQGFSGTSGELASELKMAPWQVDRARREVRRWNEVALGQSLIAAAEADE
AVKGGGRDPVYAVEWFVSEVSRLARVR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgaagaagaccctggtcccgtggagttcggcgaaaccggcacccgtcgtcatg
atctccggcagcgagtcggtgctcgtgcgcatggccaaggaccgcatcgtctcggcaacc
cggaagaaggatcccgaggagatcgaattcgacgccgccggttaccaggcaggtgagctg
gccatggcggcttcaccgtccctgttctcctccgcgaagctcatcatcgtcgacgccgtc
gagaagtgctcggaggatttcctcaacgacgctctggcctacctcgacgaacccaatgac
gatgccgtcgtgctgcttctgcacggtggcggcaatcggggtgcgaaactcgtgaagaag
ctcgacgccgccggattcccccgcgtcgacgcggcggtgctgaagaatgagagcgaccgg
gcgaagttcgcccaaagccgattcaaggccgcgaagcgtcggatcgacgaggcaggaatg
gccgcactcatgtcggcgctgggctcggatctggccgaactcaacgccggagtcgaccag
ctcatcgaagacaccgaaggcaccatcaccgccgagatcgtcgaccagtactacggcgga
cgcgtcgaagcgaccgggttcaaagtcgccgatgctgcagtgtccggagatgcgaagaac
gctctcagcctcctccgtcatgccctgtcgacaggatccgatccggttccgctcgtggcc
gcggtggcgatgaagctgcgcggaatggcgaaagtgcagggattctccggcaccagcggc
gaactcgcctcggagctgaagatggcaccgtggcaggtcgatcgggccagacgcgaagtg
cggcgctggaacgaagtggctctcggccagtcactcatcgccgccgccgaagccgatgag
gcagtcaagggcggaggccgcgacccggtgtacgccgtcgaatggttcgtctccgaagtc
agccgcctcgcccgcgtccgataa
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