Brevibacterium spongiae: L1F31_10825
Help
Entry
L1F31_10825 CDS
T09030
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bspo
Brevibacterium spongiae
Pathway
bspo03030
DNA replication
bspo03430
Mismatch repair
bspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L1F31_10825 (dnaE)
03430 Mismatch repair
L1F31_10825 (dnaE)
03440 Homologous recombination
L1F31_10825 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bspo03032
]
L1F31_10825 (dnaE)
03400 DNA repair and recombination proteins [BR:
bspo03400
]
L1F31_10825 (dnaE)
Enzymes [BR:
bspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L1F31_10825 (dnaE)
DNA replication proteins [BR:
bspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L1F31_10825 (dnaE)
DNA repair and recombination proteins [BR:
bspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L1F31_10825 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UVI37912
LinkDB
All DBs
Position
complement(2392829..2396338)
Genome browser
AA seq
1169 aa
AA seq
DB search
MLDGAARLTDLMAATKASGMSAIATTDHGYLFGAFDFWSQATAAGIKPIIGVEAYVTPGT
DRRDKTRVKWRTDESQKSDDLSGGGLYTHMTLLSRNNTGMRNLFKASSYASLDSVTAKWP
RLDQDLLENYSEGLIATTGCPSGEVQVRLRLGQYEEAKAAAGKYREIFGKENYYVELMDH
GLSIEKRVTKDLIRLSKELDIPLVATNDLHYTHESDAKAHEALLAIQSGSKLIEPTYDQG
GSRFAFSGSGYYLKTPAEMRVLFREFPEACDNTLEIAEKCEVSFDTSANYMPKFPCPPGE
DETSWLIKEVAKGLDYRYPNGVPDDVRKQADYELDIIISMGFPGYFLVVADFINWSKDNG
IRVGPGRGSGAGSMVAYAMRITDLDPLQHGLFFERFLNPDRVSMPDFDVDFDDRRRGEVI
EYVTEKYGDERVAMIVTYGTIKTKMALKDSARVLGKPFSMGEQLTKALPPAEMAKDIPLK
DIEDPESKRYKEAGEFRDLVDSDPEARETFETAKGIEGLKRQWGVHAAGVIMSSDPIIDV
IPIMRRFQDGQVITQFDYPTSEGLGLIKMDFLGLRNLTIISDAVENIKANRDFDLDLEHL
ALDDHGAYELLSRGDTLGVFQLDGGGLRALLRMMKPDNFEDISATIALYRPGPMGADSHT
NFALRKNGLQEVTPIHPELEEPLQDILGTTYGLIIYQEQVMAIAQKVAGYSLGQADILRR
AMGKKKKSELDKQQVGFFGGMKERGYSEAAAQALWDILLPFSDYAFNKAHSAAYGLVSYW
TAYLKAHYTAEYMAALLTSVGDNKDKLAIYLNECRRLGITVLPPDVNESALHFTPVGTDI
RFGMGAVRNVGSHVVEGIVDARAEKGAYTSFTDFLDKVPSHVCNKRTIESLIKAGGFDSL
GHSRRSLVEVHEEAVDSVIGVKRQEANGQFDLFAGLGGGDDAPGFSVTIPDRPEWEKKEK
LTFERDMIGLYVSDHPLNGLEGVLAAESDASIAEVVDPESHRHDGSQIKVCGMITQVIRK
VSKNSGRPYAIVTLEDLEAEIEVMFFGDTYEPVASLLATDLVISLTGRIRTSDDRPTSLM
AMSMTIPDVTDPKDRPLNLLMPMEKATEEMATKLKRILESNKGQTDVHLVLSQPGRQTVM
RLDRSIRVDPNPSLYGDLKALLGSRCFSS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgctggacggagcggcccggctcaccgacctcatggcggcgacgaaggcgtcggggatg
tccgccatcgccaccacagaccacgggtacctcttcggggccttcgacttctggtcccaa
gccacggcggccgggatcaagccgatcatcggcgtcgaagcctatgtcacccccggcacc
gaccgacgcgacaagacccgcgtgaaatggcgcaccgacgaatcgcagaagagcgacgac
ctctctggcggcggtctgtacacgcatatgaccctgctctcacgcaacaacacggggatg
cgcaacctcttcaaggcctcctcatatgcatcgctggactcggtgacggcgaagtggccg
cgtctggaccaggatctgctggagaactattccgaaggactcatcgcgaccaccggctgc
ccctcaggtgaggtgcaggtgcggctgcgcctgggacagtacgaagaagccaaagctgcg
gccgggaaataccgcgagatcttcggcaaggagaactactacgtcgagctcatggatcat
ggtctgtccatcgagaaacgggtgacgaaggacctcatccgtctgtcgaaggagctggac
attccgctggtcgccaccaacgacctgcactacacgcacgaatccgatgcgaaggcgcac
gaagcgctgctggccatccagtccggatccaaactcatcgaaccgacctacgatcagggc
ggatcccgcttcgcgttctccggttccggctattacctcaagacccccgccgagatgagg
gtcctgttcagagaattccccgaggcctgcgacaacaccctcgagatcgcggagaaatgc
gaagtctccttcgacacctcggcgaactacatgccgaagttcccatgcccgcccggtgag
gacgagacctcctggctgatcaaggaagtcgccaagggactcgactaccggtacccgaac
ggcgtgcccgacgatgtccgcaaacaggcggactacgaactcgacatcatcatctcgatg
ggcttccccggctacttcctcgtcgtcgccgacttcatcaactggtcgaaggacaacggc
atccgggtgggacccggccgtggttccggtgccggttccatggtcgcctacgcgatgcgc
atcaccgacctcgatccgctccagcacggactgttcttcgagcgcttcctcaacccggac
cgtgtgtccatgcccgacttcgacgtcgacttcgatgatcgtcgccgcggcgaggtcatc
gaatacgtgacagagaagtacggcgacgaacgtgtcgcgatgatcgtcacctacggcacg
atcaagacgaagatggcgctgaaggattccgcgcgagtgctcggcaagcccttctccatg
ggtgagcagctgacgaaggcgctgccgccggcagagatggccaaggacattccgctcaag
gacatcgaagaccccgaatccaagcgctacaaggaggcgggggagttccgggacctcgtc
gactccgaccccgaagctcgtgagaccttcgagaccgcgaagggcatcgaaggtctgaag
cgacagtggggcgtccacgccgccggcgtcatcatgtcctcggacccgatcatcgacgtc
attccgatcatgcgccggttccaagacggtcaggtcatcacccagttcgactacccgacc
tctgagggcctcgggctcatcaagatggacttcctggggttgcgcaacctcacgatcatc
tccgacgccgtcgagaacatcaaagccaaccgggacttcgatctcgacctcgaacacctt
gcgcttgatgaccacggtgcctatgagctgctgtcccgaggcgacacactcggcgtgttc
cagctcgacggcggcggactgcgggccctgctgcggatgatgaagcccgacaacttcgaa
gacatctccgcgaccattgcgctctaccgtccgggcccgatgggcgcggactcgcacacg
aacttcgcgctgcgcaagaacggtctgcaggaagtcacaccgatccacccggagctcgag
gagcccctccaggacatcctcggcaccacttacggcctcatcatctaccaagagcaggtg
atggcgatcgcgcagaaggtcgccggctactcactgggacaggcagatatcctccgccgc
gcgatgggcaagaagaagaagtccgagctcgataagcagcaggtcggattcttcggcggg
atgaaggaacgcggctactccgaggccgccgcccaggccctgtgggatattctgcttccg
ttctcggactacgcgttcaacaaggcccactcggccgcctacggtctcgtgtcgtactgg
actgcctacctcaaggcccactacacggccgagtacatggccgcactgctgacctcggtc
ggcgacaacaaggacaagctcgcgatctacctcaacgagtgccgtcgcctgggcatcacc
gtgctgcctccggacgttaatgagtccgcgctccacttcaccccggtcggcaccgacatc
cgcttcggcatgggcgcggtccgcaatgtcggctcccacgtcgtcgaaggcatcgtcgac
gcccgcgcagagaagggcgcctacacttcgttcacggacttcctcgacaaggtgcccagc
catgtgtgcaacaagcgcaccatcgaatcgctcatcaaggccggaggcttcgattcgctc
gggcacagtcgacgctcgctcgtcgaagtccatgaggaggccgtggactccgtcatcggc
gtcaaacggcaggaagccaacggccagttcgacctcttcgccgggctcggcgggggagac
gatgcaccgggcttctccgtgacgatcccggaccgccccgaatgggagaagaaggagaag
ctgaccttcgagcgcgacatgatcggcctctacgtctcggaccatccgctcaatgggctc
gaaggggtcctggccgcggagtccgacgcctccatcgccgaggtggtcgatcccgaatcg
caccgccacgacggttcccagatcaaggtctgcggaatgatcacacaggtcatccgcaag
gtgtcgaagaattcgggacgcccctatgcgatcgtcacgcttgaggacctcgaagccgaa
atcgaagtgatgttcttcggtgacacctacgaacccgtggcgagcctgctggccaccgac
ctcgtgatctccctgaccggacgcatccgcacctccgacgatcgtccgacctcgctcatg
gcgatgtcgatgacgatcccggacgtcaccgaccccaaggaccgtccgctcaacctgctc
atgccgatggaaaaggccaccgaggagatggcgacgaagctcaaacggatcctcgagtcg
aacaagggccagaccgacgtccacctcgtcctgtcccaacccggacgccagacggtgatg
cggctcgacagatcgatccgcgtcgacccgaatccgagcctctacggcgatctcaaggcg
ctgctcggctcacgctgcttcagcagctga
DBGET
integrated database retrieval system
