Brevibacterium spongiae: L1F31_11975
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Entry
L1F31_11975 CDS
T09030
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bspo
Brevibacterium spongiae
Brite
KEGG Orthology (KO) [BR:
bspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bspo03016
]
L1F31_11975 (truB)
Enzymes [BR:
bspo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L1F31_11975 (truB)
Transfer RNA biogenesis [BR:
bspo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L1F31_11975 (truB)
Prokaryotic type
L1F31_11975 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
UVI34841
LinkDB
All DBs
Position
complement(2678596..2679534)
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AA seq
312 aa
AA seq
DB search
MSDSSPQGILVCDKSQGLSSHGVVSRIRRWFGTKKVGHAGTLDPMATGVLVLGLGRGTKL
LTYITGVSKTYFATIRLGSSTPTDDADSEPDRFADPADLSGVGAAAIEAAVAKLRGSIDQ
VPSAVSAIKVDGKRSYARVRAGENVELKARRVEVSAFEIIDIRFAADEGFIDVDVEVDCS
SGTYVRALARDIGTDLGVFGHLTALRRTRVGAFDIDQAVTLPEDLDVAAPELITLAEAAR
TLLAVVTVTRDQATALMQGKTVEADDWSAGIGSEDVTGREVAVVWENELVSVAEVRSGGG
LKSVTAFAIDLA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgattcttccccgcagggcatcctcgtctgcgacaagtcgcagggtctgagctcc
cacggcgtggtctcacgcatccgccgctggttcggcaccaagaaggtcggccacgccgga
acgctcgatcccatggccacgggagtgctggtgctcggcctcggccgcggtaccaagctg
ctcacctacatcaccggggtctcgaagacgtacttcgcgacgattcgtctgggctcgtcg
accccgaccgatgatgctgactccgaacccgatcgcttcgcggatccggccgatctctcc
ggcgtgggcgccgccgccatcgaagccgcagtggccaagctgcgcggttccatcgaccag
gtgcccagtgccgtctcggcgatcaaggtcgacggcaagcgctcgtatgcgcgcgtgcgc
gcaggcgagaacgtcgaactgaaggcccgccgcgtcgaggtctcggcgttcgagatcatt
gacatccgcttcgccgcagacgaaggcttcatcgacgtcgatgtcgaagtcgactgctcc
tcgggcacctacgtgcgggcactcgcccgcgacatcggcaccgacctcggcgtgttcggt
catctcacggcgctgcgccgcacccgagtcggcgccttcgacatcgaccaggccgtgacc
ctgcccgaggatctcgacgtcgccgcaccggaactcatcaccttggccgaggcggcccgc
accctgctggccgtcgtcaccgtcacccgcgaccaggccaccgccctcatgcagggcaag
accgtcgaggccgatgactggtccgccggtatcggctcggaggacgtgaccggcagggaa
gtcgccgtggtctgggagaacgaactcgtctccgtggccgaggtgcgatccggcggcggc
ctcaagtctgtcacggctttcgccatcgacctcgcataa
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