Brevibacterium spongiae: L1F31_16475
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Entry
L1F31_16475 CDS
T09030
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bspo
Brevibacterium spongiae
Pathway
bspo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bspo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L1F31_16475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bspo03019
]
L1F31_16475
03400 DNA repair and recombination proteins [BR:
bspo03400
]
L1F31_16475
Enzymes [BR:
bspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L1F31_16475
Messenger RNA biogenesis [BR:
bspo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L1F31_16475
DNA repair and recombination proteins [BR:
bspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L1F31_16475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_IclR
Pribosyltran
MRFAP1
HEM4
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UVI35691
LinkDB
All DBs
Position
complement(3664404..3666533)
Genome browser
AA seq
709 aa
AA seq
DB search
MTESTPTSPPVSDAADDFAASAQSILAELTANPNAQFRDGQLESIRDLVQGKKRVLVVQR
TGWGKSAVYFVATRMLRAAGTGPSLIISPLLALMRDQIAAAERAGVRAASLNSSNVTEWD
SVLEDLRAGSLDVLLVSPERLNNPQFRDEVLPQLLAFLGLIVVDEAHCISDWGHDFRPDY
RRIGRILSELPHNTPVLATTATANSRVVADVAEQLGDDTTVVRGELARDSLRLGVLPGLD
ASARIAWLASHLNDFTGSGIVYTLTVSAAEDITRMLREQGHEVRAYTGRTDAEERAELEG
QLKDNRLKALVATSALGMGFDKPDLGFVIHIGAPSSAVAYYQQVGRAGRATDSADVLLLP
GAEDERIWEYFATASMPNQDDANAVLAALAEADAPLSVARLETLVGTKRSRLNLLLKTLE
VEDAVTKVKGGYVSTGLGWTYDRDRYEKVAAVRAEEAQAMLDYEATGQCRMEFLIRQLDD
PDPQPCGRCDNCAGVWFSAEISDEQRQAAAGNLHKIGLPIEPRSTWPSGLANIGVPLKGR
IPAEELAEEGRAIARLSDLGQGQTLRSFLAPDAPDAEVPGQIGKWCLEVLAQWDWKTRPE
VVVSIPSARRPVTVRSLAANLASAGRLTDGGELLQVGDHGTPDVNSAFRVKDLYEAFVVP
PEVEEAVAGKSVLLVDDEVVSRWTMTVCARLLRRAGATSVLPFALALRA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatccaccccgacatccccacccgtttccgacgcagcagacgacttcgccgcc
tccgcacagtcgatcctcgccgagctcaccgcgaacccgaacgcacagttccgcgacggc
cagctcgagtcgatccgtgacctcgtccagggcaagaaacgcgtcctcgtcgtccagcgc
accggctggggaaagtcggccgtctacttcgtcgccacccgcatgctccgggccgcaggc
accggtcccagcctcatcatctccccgctgctggcgctcatgcgcgaccagatcgccgcc
gccgaacgcgcaggagtccgcgccgccagcctcaactcctcgaacgtcaccgaatgggac
tcggtcctcgaagacctgcgggccggcagcctcgacgtcctcctcgtctccccggagcgg
ctgaacaacccgcagttccgcgacgaagtcctgccccagctcctggcgttcctcggcctc
atcgtcgtcgacgaagcccactgcatctccgactgggggcatgacttccgccccgactac
cgccgcatcggccggatcctctccgaactgccgcacaacaccccggtgctcgcgacgacg
gcgaccgcgaactcccgcgtcgtcgccgacgtcgccgaacagctcggcgacgacaccacc
gtcgtccggggcgaactcgcccgtgattcgctgcgcctcggagttctgcccggactcgac
gccagcgcccgcatcgcctggctggcatcccacctcaatgacttcaccgggtccggaatc
gtctacacactcaccgtctccgccgccgaggacatcaccaggatgctgcgcgaacagggc
cacgaggtccgcgcctacaccggccggacggatgccgaggaacgcgccgaactcgagggc
cagctcaaggacaaccgcctcaaggcgctcgtggccacctcggcgctgggcatgggattc
gacaaacccgacctgggattcgtcatccacatcggcgcgccgtcctcggccgtggcctac
taccagcaggtcggacgcgccggccgtgccaccgattccgccgatgtccttcttctgccc
ggtgccgaggatgagcggatctgggagtacttcgcgaccgcgtcgatgccgaaccaggac
gacgcgaacgccgtgctcgcagccctcgccgaggcggacgcacccctgtccgtggcccgc
ttggaaacgctggtcggaaccaagcgctcccgcctcaacctgctgctcaagaccctcgag
gtcgaagacgccgtgaccaaggtcaagggcgggtatgtgtcgaccgggctggggtggacc
tatgaccgggaccggtatgagaaggtcgcggccgtccgcgccgaagaggcccaagccatg
ctcgactacgaagcgaccgggcagtgccggatggagttcctcatccgtcagctcgacgac
cccgatccccagccgtgcgggcgctgcgacaactgcgccggagtgtggttctctgccgag
atctccgacgaacagcgccaggctgcggccgggaacctccataagatcggtctgcccatc
gaaccgcgcagcacctggcccagcgggctggccaatatcggcgtcccgctcaagggccgg
attcccgccgaagaactcgccgaggaagggcgtgccatcgcccgcctttctgacctcgga
caggggcagaccctgcgatcgttcctcgcccccgatgcccccgacgctgaggtgcccggc
cagatcggcaaatggtgcctcgaagtgctggctcagtgggattggaaaacacggcccgag
gtggtcgtgtcgatcccgagtgcccgtcgtcccgtgaccgtgcgctccctggccgccaat
ctcgcctcagccgggcgcctcaccgacggtggcgagctgctgcaagtcggcgaccacggc
accccggacgtcaacagtgccttccgcgtcaaagacctctatgaggccttcgtcgttcca
cccgaggtcgaagaggccgtggccgggaagtcagtgctgctcgtcgatgacgaggtcgtc
tcccggtggacgatgacggtgtgcgcacgactgctgcggagggcgggagccacctcggtg
ttgccgttcgcgctcgcgctgcgggcctga
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