Bacillus subtilis QB928: B657_33450
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Entry
B657_33450 CDS
T02292
Symbol
helD
Name
(GenBank) DNA 3'-5' helicase IV
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bsq
Bacillus subtilis QB928
Pathway
bsq03420
Nucleotide excision repair
bsq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bsq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B657_33450 (helD)
03430 Mismatch repair
B657_33450 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsq03400
]
B657_33450 (helD)
Enzymes [BR:
bsq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B657_33450 (helD)
DNA repair and recombination proteins [BR:
bsq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B657_33450 (helD)
MMR (mismatch excision repair)
Other MMR factors
B657_33450 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
AAA_30
Viral_helicase1
SLFN-g3_helicase
PhoH
AAA_16
DEAD
NACHT
NPHP3_N
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFQ59197
LinkDB
All DBs
Position
complement(3365768..3368158)
Genome browser
AA seq
796 aa
AA seq
DB search
MYPIIFYSISSMFVNYFLEVPFMNQQDKEWKEEQSRIDEVLKELEKKERFLETSAGGLKH
DIIGLRKSFWEDVKVNFDDAHEAIETMASIKQQAELLSDREHNHRRMDQQLKRIHQLKKS
PYFGRIDFIENGEEQAERIYIGLASCLDEKEEHFLIYDWRAPISSLYYNYSPGKAEYEVP
GETIEGEMVLKRQFMIKNGTLKAMFNTDMTIGDEMLQEVLSHHSDTQMKNIVSTIQKEQN
QIIRNEKSKILIVQGAAGSGKTSAALQRVAYLLYRHRGVIDAGQIVLFSPNFLFNSYVSS
VLPELGEENMEQATFQEYIEHRLGRKFKCESPFDQLEYCLTETKGGDFPTRLAGITWKAG
LSFQQFINEYVTRLSSEGMIFKNIIFRGQKLITKEQIQSYFYSLDQNHSIPNRMEQTAKW
LLSELNKLEKKERRKDWVVHEAELLDKEDYLDVYKKLQERKRFSESTFNDYQREQQLLAA
IIVKKAFKPLKQAVRLLAFLDVTQLYLQLFSGWGGKFQHEKMDAIGELTRSAFTDNKLLY
EDAAPFLYMQDLIEGRKKNTKIKHLFIDEAQDYSPFQMAYMRSIFPAASMTVLGDINQSI
YAHTINGDQRMDACFEDEPAEYVRLKRTYRSTRQIVEFTKAMLQDGADIEPFNRSGEMPL
VVKTEGHESLCQKLAQEIGRLKKKGHETIAVICKTAHQCIQAHAHMSEYTDVRLIHKENQ
PFQKGVCVIPVYLAKGIEFDAVLVYDASEEHYHTEHDRRLLYTACTRAMHMLAVFYTGEA
SPFVTAVPPHLYQIAE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtatccaattatattttacagtatttcatctatgtttgtcaactattttctggaggtg
ccgttcatgaatcagcaggataaggaatggaaggaagagcagtcgagaatagatgaggtg
ctgaaggagctcgaaaaaaaagagcggtttctggaaacgtctgcgggcgggttgaagcat
gatatcatcggattaagaaaaagcttttgggaggatgttaaggttaattttgatgatgcc
catgaagcgattgaaacgatggctagcattaagcagcaggcagagctgctgtctgatcgg
gaacacaatcatcggcgcatggatcagcagctcaaacgaattcatcaattgaaaaaatcg
ccttatttcggccggattgattttattgaaaacggcgaggagcaggcagagcgaatttat
atcggtttagcttcctgtttggatgagaaggaggaacactttctgatctatgactggagg
gcgccgatatcaagtttgtactacaattattccccaggaaaagcggagtacgaggtgccc
ggtgaaacgatagaaggggaaatggtgctgaaacgccagtttatgatcaaaaacggcact
ctcaaggcgatgtttaataccgatatgacgattggcgatgaaatgctgcaagaggtatta
agccatcactctgatacccaaatgaaaaacatcgtgtctacgattcagaaagaacaaaat
cagattatccgtaatgaaaaaagcaagatcctgatcgtgcagggagcggctggcagcggg
aaaacatcggctgcgcttcagcgtgtcgcttatttgttatacaggcaccgcggtgtcatt
gatgccggacaaatcgttttgttttcacccaacttcttatttaacagctatgtctcctct
gttttgccggagttaggagaagagaatatggagcaggcgacgtttcaggaatatatcgag
catcgtcttggccgcaagttcaaatgtgaaagcccctttgatcagctcgaatattgcctg
accgaaacaaagggaggcgattttccaacaaggcttgcaggaatcacatggaaggcgggt
ttatcctttcagcaattcattaatgaatacgtcacacggctttcctctgaagggatgatt
tttaaaaatattatattccgcggacaaaagctgatcacaaaggagcaaattcaatcctat
ttttactcattggatcaaaatcactccattccgaatcggatggagcaaaccgcgaagtgg
ctgctgagtgagcttaacaagcttgagaaaaaggaacggcgaaaggattgggttgttcat
gaagctgagctgcttgacaaagaggactacttggacgtgtacaaaaaactgcaggaaagg
aaacggttcagcgagagtacgtttaacgattatcaaagagagcagcagctgcttgccgcc
atcattgtgaaaaaagctttcaaaccgctcaaacaggcagtcaggctccttgcatttctt
gatgttacacaactttatttgcaattgttttctggctggggaggaaaatttcaacatgag
aagatggatgcgataggtgagctgacccgttcggcatttacggataataaattgctctat
gaggacgcggcaccgtttctttatatgcaggatctgattgagggcagaaagaaaaatacg
aaaatcaaacatctatttattgacgaagcccaggactattcaccgtttcagatggcttac
atgagaagcatttttccggctgccagcatgacagtgctcggtgatatcaatcagtccatc
tacgcgcataccataaacggggatcagcgtatggatgcgtgctttgaggatgagcctgct
gagtatgttcgtttaaagagaacatacagatcaacaaggcagattgtcgagtttaccaaa
gcgatgcttcaagatggagcggatattgagccgtttaatagaagcggggaaatgccgctc
gttgtcaaaactgaaggacatgagagcctttgccaaaagctcgcgcaagaaattggccgg
ctcaagaaaaaagggcacgaaacaatagccgtcatctgcaagactgcgcatcaatgcata
caggcgcacgcccacatgagtgaatatacagatgttcgcctgattcataaagaaaatcaa
ccatttcaaaagggtgtttgcgtgattccggtgtatttagcgaagggaattgaatttgac
gcagtgcttgtctatgatgcatctgaagaacactatcatacagagcacgaccgcaggctt
ttatatactgcgtgcacccgtgcgatgcacatgctggcggtattttatacaggtgaagcc
agtccgtttgtaaccgctgtgccgcctcacttatatcagattgctgaatga
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integrated database retrieval system
