Bacillus subtilis subsp. subtilis RO-NN-1: I33_0524
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Entry
I33_0524 CDS
T01837
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsr
Bacillus subtilis subsp. subtilis RO-NN-1
Pathway
bsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I33_0524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsr03019
]
I33_0524
03009 Ribosome biogenesis [BR:
bsr03009
]
I33_0524
Enzymes [BR:
bsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I33_0524
Messenger RNA biogenesis [BR:
bsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I33_0524
Ribosome biogenesis [BR:
bsr03009
]
Prokaryotic type
rRNA helicases
I33_0524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AEP89541
LinkDB
All DBs
Position
504986..506470
Genome browser
AA seq
494 aa
AA seq
DB search
MTITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIP
LVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKK
NPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTL
LFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQS
PELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV
AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTT
KRKMDRMKEPTLDEALEGQQQVTVERLRTTISENNLNFYMTAAAELLEDHDAVTVVAAAI
KMATKEPDDTPVRLTDEAPMVSKRYKNQRSSKRRDGQGGGYRGGKGKSNNRSSYDKKRSN
DRRSSGDRRQKKSY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgactataacgtttcaagattttaatttaagttctgatctcatgaaagcaattaatcgt
atgggatttgaagaagcaacaccgattcaggcacaaacgataccgctcggactttcaaat
aaagacgtcattggacaagcgcaaacaggtacaggtaaaacagctgcgtttggtataccc
cttgttgaaaaaattaaccccgagtctcctaatattcaagcaatcgtaatcgcgccaacc
cgtgaattagccattcaagtatctgaagaattgtataaaatcggacaagataaacgtgcg
aaggttcttcctatttacggcggacaggatattggacggcaaatccgggcgttaaagaag
aatccgaatatcattgtcggaacacctggacgtcttcttgaccacatcaaccgccgcaca
attcgtttaaacaatgtaaataccgttgtaatggatgaagcggatgaaatgctgaacatg
ggattcattgacgatattgaatctatcctttcaaacgtgccaagcgagcatcagacactt
ctgttctctgccacaatgcctgcgccgatcaaacgcattgcagagcgctttatgactgag
ccggaacacgtaaaagtaaaagcgaaagaaatgacggtttctaacattcagcagttctat
ttggaagtgcaagaacgtaaaaaattcgatacactgactcgtcttcttgatattcagtct
cctgagcttgcgatcgtattcggacgtacaaaacgccgtgtcgatgagctggctgaagcc
ctgaaccttcgcggatatgcagctgaaggtattcacggtgacttaacacaggccaaacgt
atggttgcgcttcgtaaatttaaagaaggcgcaatcgaagttctagtcgcaactgatgtt
gccgctcgcggacttgatatctcaggtgttacacacgtatacaacttcgacgtgcctcaa
gatcctgaaagctacgttcaccgtatcggaagaacgggccgtgcaggaaaaacaggtatg
gcgatgacgttcattacaccgcgtgagaaaagcatgcttcgcgcaattgaacaaacaaca
aaacgcaaaatggaccgcatgaaggagcctacacttgatgaagcgttagaaggccagcaa
caggttactgttgaacgtcttcgcacaacaatcagtgaaaacaacctgaacttctacatg
acagcggcagctgagctgcttgaagatcatgatgcagtaacagtggttgcggcggctatc
aaaatggctacaaaagagccagacgacacaccggttcgtttaacagacgaagcaccgatg
gtcagcaaacgctacaagaaccagcgctcttctaaacgcagagacggtcaaggcggcggc
taccgcggcggaaaagggaaaagcaacaaccgttcttcctacgacaaaaagcgttcaaac
gatcgccgttcttcaggtgacagacgccagaaaaaatcttactaa
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