Bacillus subtilis subsp. subtilis RO-NN-1: I33_1509
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Entry
I33_1509 CDS
T01837
Symbol
ykoV
Name
(GenBank) spore germination DNA repair Ku protein YkoV
KO
K10979
DNA end-binding protein Ku
Organism
bsr
Bacillus subtilis subsp. subtilis RO-NN-1
Pathway
bsr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I33_1509 (ykoV)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsr03400
]
I33_1509 (ykoV)
DNA repair and recombination proteins [BR:
bsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I33_1509 (ykoV)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
DUF6058
DUF1631_2nd
Motif
Other DBs
NCBI-ProteinID:
AEP90477
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All DBs
Position
complement(1383851..1384738)
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AA seq
295 aa
AA seq
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MHTMWKGSISFGLVNIPIKLYAATEDKDIKLRSLHKEDHAPIKYEKVCTNCEKTLGPDEI
VKGYEYVKGKYVVLTDEDLKSLKQEHEEKAVEIVDFVQLQEIDPIYFNRSYFVGPGDNGT
KAYTLLREALRSTGKIGIANMTIRSKQQLAILRVYENCIVMESIHYPDEVRSAAHVPGVP
DQSNVNDKELQTAITLIDELTAKFEPEKYEDTYRQALLQRVNDKLENKETAVTPDKAPPR
EDVIDLVSALQASIDRTRRPNRETPAAAPAQQAAEPKGAGDKKRKTTRKKASGTS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcatacaatgtggaagggatcgatcagcttcggattagtaaacatccccatcaagcta
tatgcggccacagaagataaagatattaaactgcgcagcctccataaagaggatcacgca
ccaatcaaatacgagaaagtttgcacaaattgcgaaaaaactcttggccctgatgaaatt
gtgaagggatatgaatatgtaaaagggaaatatgtagtgctgacggacgaagatttaaaa
agcttaaaacaggagcatgaggagaaagcggttgagattgttgactttgttcagcttcag
gaaattgatccgatttattttaaccgctcctactttgtcggccccggggataatgggacg
aaggcctataccctgctgcgtgaggcgctgcgctcaaccggaaagatcggtatcgccaat
atgacaatcaggtcaaagcagcagctggcgattctccgcgtttatgaaaattgtatcgtc
atggagtctatccattatcccgatgaggtcagaagcgccgctcatgtcccaggtgtacct
gatcaatcgaatgtaaacgataaggaactgcaaaccgctatcacattaatagatgaactg
actgctaagtttgagcctgagaaatatgaagacacgtaccgacaggcgctgctgcaaaga
gtcaacgacaagctagaaaataaagaaacggccgtcactcctgataaagcgccacctcgt
gaagatgtcattgacctggtaagcgctctgcaagccagcatcgaccgaaccagaaggccg
aaccgggagacaccggctgccgcacctgcacaacaagctgctgaaccgaaaggagccgga
gataaaaaacgaaaaacaactagaaaaaaagcctccggcacatcatag
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