Bacillus subtilis subsp. subtilis RO-NN-1: I33_1798
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Entry
I33_1798 CDS
T01837
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bsr
Bacillus subtilis subsp. subtilis RO-NN-1
Brite
KEGG Orthology (KO) [BR:
bsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsr03032
]
I33_1798 (topA)
03400 DNA repair and recombination proteins [BR:
bsr03400
]
I33_1798 (topA)
Enzymes [BR:
bsr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I33_1798 (topA)
DNA replication proteins [BR:
bsr03032
]
Prokaryotic type
DNA Topoisomerases
I33_1798 (topA)
DNA repair and recombination proteins [BR:
bsr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I33_1798 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Zn_ribbon_3
Zn_ribbon_ACC
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
AEP90764
LinkDB
All DBs
Position
1658136..1660217
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AA seq
693 aa
AA seq
DB search
MKMSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIR
GKGPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLNSDCRVVFNEITKDAI
KESFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDR
EKEINDFKPEEYWTIDGTFLKGQETFEASFFGKNGKKLPLNSEADVKEILSQLKGNQYTV
EKVTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGREGTVGLITY
MRTDSTRISNTAVDEAAAFIDQTYGKEFLGGKRKPAKKNENAQDAHEAIRPTSVLRKPSE
LKAVLGRDQMRLYKLIWERFVASQMAPAVLDTMSVDLTNNGLTFRANGSKVKFSGFMKVY
VEGKDDQMEEKDRMLPDLQEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEERGIGRPS
TYAPTLDTIQRRGYVALDNKRFVPTELGQIVLDLIMEFFPEIINVEFTAKMERDLDHVEE
GNTEWVKIIDNFYTDFEKRVKKAESEMKEVEIEPEYAGEDCELCSSPMVYKMGRYGKFLA
CSNFPDCRNTKPIVKQIGVKCPSCGEGNIVERKSKKKRVFYGCDRYPDCEFVSWDKPIER
KCPKCGKMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtctgattatctagtcatcgtggaatcgcccgctaaggcgaaaacgattgaa
cgttacttaggtaaaaaatataaagtaaaagcatcaatgggacatgtccgggatcttcca
aaaagtcaaatgggagttgacatagaacagaattttgaaccgaaatatattaccattcga
ggtaaaggcccggtattaaaagagctgaaaacggctgcgaaaaaagccaaaaaagtgtat
ctcgcagccgaccccgacagagaaggggaagcgattgcatggcatttggcacacagtctt
gatttagatctcaactcagactgccgtgtggtgtttaacgaaattacaaaagacgctatt
aaggaatcgtttaagcatccccgcatgatcaatatggatttagtggatgcacagcaagcg
agacgtattttagacaggcttgtcggatataaaatcagtccgatcttatggaaaaaagtc
aaaaaagggcttagcgcaggacgcgtgcaatccgttgccctccgtttgattattgaccgt
gaaaaagagattaacgactttaagcctgaggaatattggacaattgacggtacgttctta
aaaggtcaagaaacctttgaagcgagctttttcgggaaaaacggcaaaaaacttccttta
aatagtgaagctgatgtaaaagagattctttctcagctcaaagggaatcaatatacagtt
gaaaaagtaaccaaaaaggaacgcaaacgtaatcctgctttgccttttaccacttctacc
ctgcagcaggaagcggctcgcaagctcaatttcagagcgaagaaaacgatgatgattgca
cagcaattatatgaaggaattgatttaggaagagaaggaacggttggtctgatcacgtat
atgagaacggattcaacccgtatttcaaatacggctgttgatgaagcagctgcttttatt
gatcagacatatggaaaagagttcctaggcggaaaacggaagcctgcgaaaaagaatgaa
aatgcccaggatgcccacgaagcaattcggccgacatcagttcttagaaaaccaagtgaa
ttaaaagcagtcctcggcagagaccaaatgagactgtataaattaatttgggagcgtttt
gttgccagccaaatggcaccagctgttctcgatacaatgagtgtcgacctgacaaacaac
ggtttgacatttcgtgcaaatggaagtaaagtcaagttttccgggtttatgaaggtgtat
gttgaaggaaaagacgatcaaatggaagaaaaagaccggatgctgcctgacttacaagaa
ggcgacacggtattatcaaaggatatagaacctgagcagcattttacccagccgcctccg
cgatatactgaggcccggcttgttaaaacccttgaagaacgcggtatcggccgtccatcc
acatatgctccgacacttgatactattcagcggcgcggctacgtggcattggataataaa
cgtttcgttccgaccgaattaggtcagatcgttcttgacttgatcatggagtttttccct
gagatcattaacgttgagtttacagctaaaatggagagagatcttgatcatgttgaagaa
ggaaataccgaatgggtcaagattatcgataatttctacaccgattttgaaaaacgcgtc
aaaaaagccgaatcggaaatgaaggaagttgagattgaaccagagtatgctggagaggat
tgtgaattgtgcagttctccaatggtatataaaatgggacggtacggtaaattcttagct
tgctccaacttccctgactgccggaacacgaaaccgattgtgaaacaaatcggtgtgaag
tgcccgagctgcggagaaggaaacattgttgagcgaaaatcgaaaaagaaacgggtgttt
tacggctgtgaccgttatccggactgtgaattcgtatcatgggacaaaccaattgaacga
aaatgcccgaaatgcggaaaaatgctcgtcgagaaaaaactcaaaaaaggcatacaagtc
caatgtgtggaatgcgattataaggaagaaccacagaagtag
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