Bacillus subtilis subsp. subtilis RO-NN-1: I33_1845
Help
Entry
I33_1845 CDS
T01837
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit, Gram-positive type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bsr
Bacillus subtilis subsp. subtilis RO-NN-1
Pathway
bsr03030
DNA replication
bsr03430
Mismatch repair
bsr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bsr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I33_1845 (polC)
03430 Mismatch repair
I33_1845 (polC)
03440 Homologous recombination
I33_1845 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bsr03032
]
I33_1845 (polC)
03400 DNA repair and recombination proteins [BR:
bsr03400
]
I33_1845 (polC)
Enzymes [BR:
bsr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I33_1845 (polC)
DNA replication proteins [BR:
bsr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I33_1845 (polC)
DNA repair and recombination proteins [BR:
bsr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I33_1845 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_a_NII
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
DEDDh_C
Zn-ribbon_8
DZR
Motif
Other DBs
NCBI-ProteinID:
AEP90811
LinkDB
All DBs
Position
1701614..1705927
Genome browser
AA seq
1437 aa
AA seq
DB search
MEQLSVNRRQFQILLQQINMTDDTFMTYFEHGEIKKLTIHKASKSWHFHFQFKSLLPFQI
YDTLTTRLTQSFAHIAKVTSSIEVHDAEVSESIVQDYWSRCIEELQGISPPIISLLNQQK
PKLKGNKLIVKTKTDTEAAALKNKYSSMIQAGYRQFGFPDLQLDAEIFVSEQEVQKFREQ
KLAEDQERAMQALIEMEKKDKESDEDQAPSGPLVIGYQIKDNEEIRTLDSIMDEERRITV
QGYVFDVETRELKSGRTLCIFKITDYTNSILIKMFAREKEDAALMKSLKKGMWVKARGSI
QNDTFVRDLVMIANDVNEIKAKTREDSAPEGEKRVELHLHSPMSQMDAVTGIGKLVEQAK
KWGHEAIALTDHAVVQSFPDAYSAAKKHGIKMIYGMEANLVDDGVPIAYNAAHRLLEEET
YVVFDVETTGLSAVYDTIIELAAVKVKGGEIIDKFEAFANPHRPLSATIIELTGITDDML
QDAPDVVDVIRDFREWIGDDILVAHNASFDMGFLNVAYKKLLEVDKAKNPVIDTLELGRF
LYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATAYLLLKMLKDAAEKGIQYHDELNENM
GQSNAYQRSRPYHATLLAVNSTGLKNLFKLVSLSHIHYFYRVPRIPRSQLEKYREGLLIG
SACDRGEVFEGMMQKSPEEVEDIASFYDYLEVQPPEVYRHLLELELVRDEKALKEIIANI
TKLGEKLNKPVVATGNVHYLNDEDKIYRKILISSQGGANPLNRHELPKVHFRTTDEMLEA
FSFLGEEKAKEIVVTNTQKVASLVDDIKPIKDDLYTPKIEGADEEIREMSYQRARSIYGE
ELPEIVEARIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTEI
TEVNPLPPHYVCPECQHSEFFNDGSVGSGFDLPDKTCPHCGTPLKKDGHDIPFETFLGFK
GDKVPDIDLNFSGEYQPQAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYAGDNNLH
MRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATGSEWKTTHFDF
HSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGTESLGVTEEQIG
CKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICELS
EVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMKNNNVPDWYIDSCKKI
KYMFPKAHAAAYVLMAVRIAYFKVHHALLYYAAYFTVRADDFDIDTMIKGSTAIRAVMED
INSKGLDASPKEKNLLTVLELALEMCERGYSFQKVDLYRSSATEFIIDGNSLIPPFNSIP
GLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTILEYLDRHGCLESLPDQNQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggaacagttatcagtaaacagaaggcagtttcaaattcttctgcagcagattaatatg
acagatgataccttcatgacatactttgaacatggcgagattaaaaagctgacaattcac
aaagcttctaagtcttggcattttcattttcaatttaaatctttgctgccttttcaaata
tatgacacattaacaacgaggctgacgcaatcgtttgcccacatagcaaaagtgacatct
tcaattgaagttcacgatgccgaggtcagtgaaagtatcgttcaagactactggtcacgc
tgcattgaagaactgcagggcatttcgccgccgattatcagtcttttaaaccagcaaaaa
ccgaagctgaagggcaataaactgattgtcaaaaccaaaacggatacagaagcggctgcg
ctaaagaacaaatacagttccatgatacaagcaggctaccgtcaatttggctttccggat
cttcagcttgatgctgaaatatttgtatccgagcaggaagttcaaaagtttcgggagcaa
aagcttgcagaagaccaagagcgggctatgcaggccttgattgaaatggagaagaaagat
aaagaaagtgatgaagaccaagcaccatctggtcctcttgttatcggttatcaaattaaa
gataacgaggaaatccggacacttgacagcatcatggacgaagaacggagaattacggtc
caaggttatgtgtttgatgtggagacgcgcgagctgaagagcgggcgcacgctgtgtatc
ttcaaaattacagactatacaaatagtattttgatcaaaatgtttgcacgtgaaaaagaa
gatgcggcactgatgaagtctctgaaaaaaggaatgtgggtaaaagcacgcggaagcatt
caaaatgatacatttgtcagagaccttgtcatgatcgcaaatgacgtgaacgaaataaaa
gcaaaaacccgtgaagattcagcacctgaaggagaaaaaagagtggaattgcatcttcat
tccccaatgagccaaatggatgctgttacgggtatcggaaagcttgtcgaacaggctaaa
aaatgggggcatgaggccatcgctttgaccgaccatgctgtcgttcaatccttccctgat
gcgtattctgcggccaaaaagcatggaattaaaatgatttacgggatggaagcgaatctc
gtggatgatggcgtgccaattgcttataatgccgcacatcgtctgctcgaagaagaaaca
tatgttgtttttgacgttgagacgacaggattgtctgctgtatacgataccattattgag
ctggctgcagtaaaagtaaaaggcggagaaattattgataaatttgaggcgtttgcgaac
ccgcatcgtccgctttccgccactatcatagagctgacagggatcactgatgatatgcta
caagacgctccggatgtcgtagatgtaataagagatttcagagaatggattggcgatgat
atccttgtcgctcataatgcaagctttgatatgggattcttaaatgtagcctataaaaag
cttcttgaagtcgataaagctaaaaacccagtcattgacacgcttgaacttggacgtttt
ctctatccggaatttaagaaccaccggttgaacacactttgtaaaaagtttgatatcgaa
ctcacacagcatcaccgtgcgatctatgatactgaggcaaccgcttatttgcttctgaaa
atgctgaaagacgcagctgaaaaaggtattcagtaccatgatgagttgaatgaaaatatg
ggtcagtccaatgcttatcaaagatcaagaccgtatcatgcaacattacttgccgtgaac
agcacgggacttaaaaatttatttaagcttgtgtcactttctcatattcattatttttac
agagtgccacgtatcccgagatctcagcttgaaaaatacagggaagggcttctgatcggt
tctgcctgtgacaggggagaggtttttgagggaatgatgcaaaaatcgcctgaagaggtg
gaagatatcgcgtcattctatgattaccttgaggttcagccgcctgaagtgtatcgtcac
ttgctggagcttgaactggtccgtgatgaaaaagcgttgaaagaaattattgcgaatatc
acgaagctgggggaaaagcttaataaaccggttgttgctacgggaaatgttcattacttg
aatgatgaggataaaatctacagaaagattttaatatcctcacaaggcggggcaaatccg
ctaaacaggcatgaactgccgaaagtgcatttcagaacgacagacgaaatgcttgaagct
ttttctttcttaggtgaagaaaaagcgaaggagatcgtagtcaccaatacccaaaaggtt
gcttctttagttgatgacatcaagccgattaaagatgatttatatacgccgaaaatcgaa
ggcgccgatgaagagatcagagaaatgagctatcagcgcgcaagaagcatttacggggaa
gagctgcctgaaattgtcgaagctcggattgaaaaagagttaaagagtatcattggccac
ggatttgctgttatttacttgatctctcacaaacttgtaaaacgttcactagatgacggg
tatctcgttggttcccgtggttccgtaggatcttcattagttgcgacacttactgagatt
actgaggtaaacccgctgccgccgcactatgtttgtcctgagtgccagcattctgagttc
tttaatgacggttctgtcggttctggttttgacctgcctgacaagacatgtcctcattgc
ggaacgcctttgaaaaaagacggccatgatattccatttgaaacgttcttaggatttaaa
ggggacaaagtacctgatatcgatttgaacttctcaggggaatatcagccgcaagcacac
aattacacaaaagtattgttcggagaagacaatgtatatcgtgcgggaacaataggcacg
gtggcagaaaaaacagcctacggttatgtaaaaggctatgccggagataacaatcttcat
atgcgcggtgccgaaatagatcggctcgtacaggggtgcacaggtgtaaaacgtacaact
ggacagcaccctggcggtattatcgtagttccggattatatggatatttatgatttttca
ccgatccagttcccggcagatgccacaggttcagagtggaaaacgactcattttgatttc
cactccatccatgacaacctgttaaagcttgatattctaggacacgatgacccgaccgtt
attcggatgcttcaagacttaagcggaatagatccgaaaacaattccgacggatgatcct
gaagtgatgaagatcttccagggaaccgaatcactcggtgtgactgaagaacagattggc
tgtaaaacgggcactcttggaattcctgaattcggtacccgatttgtccggcagatgctt
gaagatacaaagccgaccactttttctgagcttgttcagatttcaggcttgtctcacgga
actgatgtatggcttggcaatgcacaggagctcatccacaataatatttgtgagctgagt
gaggttatcggctgccgtgatgacattatggtttatttaatctatcaaggccttgagccg
tcccttgcctttaaaatcatggaattcgtgcgtaaaggaaaaggattaacgcctgaatgg
gaagaagaaatgaaaaataacaatgtcccagactggtatattgattcttgtaaaaagatt
aaatacatgttcccgaaagcccacgccgcggcatatgtcttaatggcagtccgcattgct
tactttaaagtgcatcatgctcttttgtattatgcggcttattttaccgttcgtgcagat
gactttgatatcgatacaatgatcaagggctctacagcaatcagagcggtaatggaggat
ataaactctaaaggacttgatgcttcaccgaaggaaaagaaccttctgactgttttagaa
ttagcgcttgagatgtgtgagagaggctattcattccaaaaagtcgatttatatcgctcc
agcgccacagagtttattattgacggcaacagtcttattccgccgtttaactctattcca
gggttagggacgaacgctgctttgaacattgtaaaagcgcgcgaagaaggcgaattcctc
tctaaagaagatttgcaaaagagagggaaagtatcaaaaacgattttagagtacttagat
cgccatggctgtctggagtcactgcctgatcaaaaccaattatcactgttctaa
DBGET
integrated database retrieval system
