Bacillus subtilis subsp. subtilis RO-NN-1: I33_1865
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Entry
I33_1865 CDS
T01837
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bsr
Bacillus subtilis subsp. subtilis RO-NN-1
Pathway
bsr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I33_1865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsr03019
]
I33_1865
Messenger RNA biogenesis [BR:
bsr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I33_1865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEP90831
LinkDB
All DBs
Position
1723889..1725556
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AA seq
555 aa
AA seq
DB search
MKKKNTENVRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYL
IERADRVKAIFLTHGHDENIGGVFYLLNKLSVPVYGTKLTLALLREKLKQYGHNRKTDLR
EIHSKSVITFESTKVSFFRTIHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPALNQTCDIG
EIAKIGNSGVLALLSDSANAERPGYTPSEAAVSGEISDALYNSENRVIIAVFASNINRIQ
QVIHAAAQNGRKIAVAGKNLQSVLQLARKLGYIEADDELFISVQDVKKYPKREVAIITAG
SQGEPLAALTRMANKAHKQLNIEEGDTVVIASTPIPGQELIYSKTVDLLARAGAQVIFAQ
KRVHVSGHGSQEELKLMINLLKPKYLIPVNGEYRMQKAHSKIAEETGMKRSDIFLIEKGD
VVEFRGQNVKIGDKVPYGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKQKKHL
VSGPEIITRGFVYVRESEGLIVQATELVRSIVTEATETSNVEWSTLKQAMRDALNQFLYE
KTKRKPMIIPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaaaaatacagaaaacgttagaattatcgcccttggcggtgtcggagagatt
gggaagaacctttatgtcattgaaattgactcagacatatttgtcgttgatgccggcctt
atgcatccagaaaacgaaatgctcggtattgatgtagtgattcctgacatatcatatttg
attgaacgggctgaccgcgtcaaggcaatctttttaacgcacgggcacgatgaaaatatc
ggcggcgttttttacttattaaacaagctgtccgttccagtgtacggaacaaaactgacg
cttgcactgttaagagagaaattaaaacaatacggacataaccgaaaaactgatttaaga
gaaattcactcaaaatctgtcattacatttgaatcaacaaaagtatcgttctttagaacg
attcacagcatccctgattctgtaggtgtgagctttaaaacatcacttggatctattgta
tgcacgggagacttcaaatttgaccaaacacctgcacttaatcagacatgcgacattggc
gagatcgccaagatcggcaatagcggcgtgctcgctctgctttctgacagtgcaaatgcg
gaacggccgggttacaccccttcggaagctgctgtcagcggagaaatttctgatgcgctg
tataattcagagaaccgggtgattattgctgttttcgcatccaatattaaccggattcag
caagtcattcatgcagcggctcaaaatggcagaaagattgccgtagccggaaaaaatctt
caatctgttctgcagctggcaagaaagttaggatacattgaagcagatgatgaattgttt
atttccgtacaggatgtcaaaaaatatccgaagcgcgaagtggccattattacagccgga
agccagggtgaaccattagctgctctgacaagaatggcaaacaaagctcacaaacagctg
aacattgaagaaggggatacggtggtcattgcgtcaactccgattcccgggcaggaactc
atttactctaaaacagtagatcttcttgcgagagccggtgcacaagtcatctttgcccaa
aagcgtgttcatgtatcaggccacggctcacaagaagagttaaagctgatgatcaacctg
cttaaaccaaaatatttgattcctgtaaacggcgaatacagaatgcaaaaagctcattca
aaaattgctgaagaaaccggcatgaagcgcagtgacatcttcttaattgaaaaaggagac
gtcgttgaattccgcggccaaaacgtaaaaattggggataaagttccttacggcaatatt
ttaattgatggtttaggagtcggtgatattggcaatatcgtattgagagatcgccgcttg
ctttcacaggacggaattttaatcgttgtcattacacttgataaacaaaagaaacatctt
gtatcaggaccagaaattatcactcgcggctttgtttatgtaagagagtctgaaggtcta
atcgtacaggctactgagcttgtccggtccatcgtgacagaagcgactgaaacatcaaat
gtcgaatggtcaacgctgaagcaggcaatgcgggatgctttgaaccaattcctttatgaa
aaaacgaaacgtaaaccgatgatcatcccaattattatggaagtataa
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