Bacillus subtilis subsp. spizizenii W23: BSUW23_00550
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Entry
BSUW23_00550 CDS
T01302
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Pathway
bss03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSUW23_00550 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bss03021
]
BSUW23_00550 (rpoC)
03400 DNA repair and recombination proteins [BR:
bss03400
]
BSUW23_00550 (rpoC)
Enzymes [BR:
bss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSUW23_00550 (rpoC)
Transcription machinery [BR:
bss03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSUW23_00550 (rpoC)
DNA repair and recombination proteins [BR:
bss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSUW23_00550 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ADM36168
UniProt:
E0TZE0
LinkDB
All DBs
Position
119876..123475
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLVKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERAGAVGEGMVFKNTDEALLAYQNGYVHLHTRVAVA
ANSLKNVTFTEEQRSKLLITTVGKLVFNEILPESFPYMNEPTKSNIEEKTPDRFFLEKGA
DVKAVIEQQPINAPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQEILEEAQSKVDNVMKQFRRGLITEEERYERVISIWSAAKDVIQGKLMKSL
DELNPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKPLKEGTETIERLE
ERLIGRFARKQVKHPETGEVLVNENELIDEDKALEIVEAGIEEVWIRSAFTCNTPHGVCK
RCYGRNLATGSDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATITEIDGTVVEINEVRDKQQEIVVQGAVETRSYTAPYNSRLKVAEGDKITR
GQVLTEGSIDPKELLKVTDLTTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTDVLPGTLLDIHQFTEANKKVLLEGNRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMMKYRKVKPVSNVQPTEDMVPVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtgaacaattttgagtatatgaacatcggtcttgcttcaccggataaaatc
cgttcatggtcttttggtgaagtgaaaaagcctgaaacgataaactatcgtacgttaaaa
cctgaaaaggacggtctattctgcgaacgcattttcggaccgactaaggactgggaatgt
cattgcgggaagtacaagcgagttcgttataaaggcgtagtttgtgaccgctgcggagtc
gaagtaacacgggctaaagtccgtcgtgagagaatggggcacattgaactggctgcccca
gtttcccacatttggtatttcaaaggtattccaagccgtatgggtcttgtgctggatatg
tcacctcgtgctttagaagaagtcatttactttgcttcttacgttgtaactgatccggca
aacacaccgcttgaaaagaaacagcttctgtctgaaaaagaatatcgtgcttatcttgat
aaatacggtaataagttccaagcgtctatgggtgcagaagcgattcataaacttcttcaa
gatatcgatcttgtaaaagaagttgatatgttaaaagaagagctgaaaacttcacaagga
cagcgccgtacacgtgcgatcaaacgtcttgaagttttagaagccttccgtaactcagga
aacaagccttcttggatgatccttgatgtgcttcctgttattcctcctgagcttagaccg
atggttcagctagatggcggacgttttgcgacttctgatttgaatgacctttatcgtcgt
gtcatcaaccgtaacaatcgtttgaaacgccttttggaccttggtgcgcctagcatcatt
gttcaaaacgaaaagcgtatgcttcaagaggctgtcgatgctttaattgacaacggccgc
cgcggacgtcctgtaacaggtcctggtaacagaccgttaaaatctctttctcacatgttg
aaagggaagcaaggccgtttccgtcaaaaccttcttggtaaacgtgtcgattactctgga
cgttctgtaatcgtcgttggtcctcatttgaaaatgtatcaatgcggattaccgaaggaa
atggcgcttgaacttttcaaacctttcgttatgaaggagcttgttgaaaaaggtcttgct
cacaacattaagagtgcgaaacgtaaaattgagcgcgtacagcctgaagtatgggatgta
ctggaatcagttattaaggagcatccggtacttctgaaccgtgcccctacacttcacaga
ttaggtatccaagcgtttgaaccaacgctagttgaaggacgcgcaatccgtcttcacccg
ctcgtatgtacagcttacaacgctgactttgacggtgaccaaatggcggttcacgtacca
ttatctgctgaagctcaagctgaagcacgcatcttgatgcttgctgctcaaaacatcttg
aaccctaaagatggtaaaccggttgtaacaccgtctcaggatatggtactgggtaactat
tacctgacacttgagcgtgccggtgctgtcggtgaaggtatggtcttcaagaatacagac
gaagcgcttcttgcttatcaaaacgggtatgttcaccttcatacgagagtagctgttgca
gctaactcccttaagaatgtgacatttaccgaagaacagcgttcaaaattgttaattaca
actgtcggtaagcttgtcttcaatgaaattcttccggaatcattcccttacatgaatgaa
ccaacgaagagcaacattgaagagaaaacacctgaccgtttcttcttagaaaaaggtgcc
gatgttaaagctgttattgaacagcagccaatcaatgcaccatttaaaaaaggaattttg
ggtaaaatcatcgcggaaatctttaaacgattccatatcacggaaacgtctaaaatgctt
gaccgcatgaaaaacctaggtttcaaatattcaacaaaagctggtattacagttggggtt
tctgacatcgtcgtactcgatgataaacaagaaattcttgaggaagcgcaaagcaaagtt
gataacgtcatgaagcaattccgacgtggtctaatcactgaagaagaacgctatgagaga
gttatctctatctggagtgctgcaaaagacgttatccaaggcaaactgatgaaatcactt
gatgagctcaacccgatctacatgatgagtgactctggtgcccgtggtaacgcgtctaac
ttcacgcagcttgccggaatgcgcggcctgatggccaacccggctggacgtatcattgaa
ttaccgatcaaatcaagtttccgtgaaggtctgacagtattggagtactttatctccact
cacggtgcgcgtaaaggtcttgccgataccgcccttaaaactgctgactcaggttacctt
acacgccgtctcgttgacgttgcgcaggatgttatcatccgtgaaactgattgcggaact
gatcgaggaatccttgctaagcctcttaaagaaggaactgaaacaattgagcgcttagaa
gaacgcttaatcggccgttttgcacgaaaacaagtgaagcaccctgaaacaggtgaagtg
cttgtaaacgaaaacgaactgatcgatgaagataaagcactggagattgtagaagccggt
attgaagaagtgtggatccgttctgccttcacatgtaatacgcctcatggtgtatgtaaa
cgatgctatggccgaaatcttgcaactggctccgatgttgaagtcggtgaagctgtcggt
atcattgctgcccaatcaatcggtgagcctggtacacagttaacaatgcgtacattccat
acaggcggggttgctggagacgatatcactcagggtcttccgcgtatccaagagcttttc
gaagcgcgtaatccgaaaggtcaggcaacaattacagaaatcgacggtacagtcgttgag
atcaatgaagttcgtgataagcaacaggaaattgtggttcaaggcgcagtggaaacacgt
tcttatacggcaccttataactcccgcctgaaagtagcggaaggagataaaattactcga
ggccaagtactgacagaaggttcaatcgatccgaaagagcttcttaaagtgactgacctg
actactgttcaagagtatcttctccatgaagttcaaaaggtttaccgtatgcagggtgtt
gaaatcggcgataaacacgtagaggtaatggttcgccagatgcttcgcaaagtccgcgta
attgacgccggtgacactgatgtacttccaggtacattgcttgatattcaccaatttact
gaagcgaacaaaaaggtattgcttgaaggcaatcgacctgctacaggccgtcctgtcttg
ctcggtattacaaaagcatctcttgaaactgattcattcttatctgctgcttccttccag
gaaacaacacgtgtccttacagacgcagcgatcaaaggtaagcgtgatgagcttcttggc
ttgaaagagaatgttatcatcggtaagcttgttccagctggtacaggtatgatgaaatac
cgtaaagtaaaaccagtttcaaatgttcagccgactgaagacatggttccggttgagtaa
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integrated database retrieval system
