Bacillus subtilis subsp. spizizenii W23: BSUW23_03600
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Entry
BSUW23_03600 CDS
T01302
Symbol
yesX
Name
(GenBank) polysaccharide lyase
KO
K18198
rhamnogalacturonan exolyase [EC:
4.2.2.24
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BSUW23_03600 (yesX)
Enzymes [BR:
bss01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.24 rhamnogalacturonan exolyase
BSUW23_03600 (yesX)
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
ADM36776
UniProt:
E0TUV8
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Position
742437..744245
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AA seq
602 aa
AA seq
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MTRGLIAVKTEQGVFVSWRFLGTDHETTAFHLYRDGARITRMPIADSTNFLDQNGTADSV
YQVAAVNKGRKEKLSKEAPVWRENVLEVPLNKPEGGITPDGKPYTYSANDASVGDVDGDG
EYEIILKWDPSNAKDNAHDGYTGEVLIDAYKLDGTFLWRINLGKNIRAGAHYTQFMVYDL
DGDGKAEIAMKTADGTTDGKGHIIGDEHADYRNEQGRILSGPEYLTVFKGETGEALTTVE
YEPPRGKLEDWGDGYGNRMDRFLAGIAYLDGERPSLVMARGYYTRAVLVAYDFRNGRLKK
RWIFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGAMAVDHDGTGLYTTGLGHGDAM
HVGDLDPSRKGLEVFQVHEDASKPYGLSLRDAGTGEILWGVHAGTDVGRGMAAHIDPNYK
GSLVWGIDPPGNDGMSYGLFTSKGEKISDKAPASANFAIWWDGDLVRELLDHDWDGTVGR
PKIEKWDAENRCLKTIFQPDGVLSNNGTKGNPVLQANLFGDWREEVIWRTEDSSALRIYT
TTHLTRHRFYTLMHDPVYRLGIAWQNTAYNQPPHTGFYLGTGMKKPPKPALYIAGSKAEA
PL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
ttgaccagaggcttaattgcggttaagacggagcagggcgtgtttgtcagctggcgtttt
ctcggaacggatcatgagacgacggcttttcacctttatcgggatggagcgcggatcacc
cgcatgccgatcgcggacagcaccaattttctcgatcaaaacggaacggcggactctgtt
taccaggtggcggccgtcaataaaggacggaaagaaaagctgtccaaagaagctcccgtc
tggcgggaaaatgtcctagaggtgccgcttaacaaaccggaaggcggtatcacgccggac
ggaaagccgtacacgtacagcgccaatgatgccagtgtcggggatgtggatggagatgga
gaatatgaaatcattctgaagtgggacccgtccaatgcaaaagacaacgcccatgacgga
tacaccggggaggttctcatagatgcctataaactggacggcacctttttgtggcgcatc
aacctcggcaaaaacatcagagcaggcgcgcattatacccagtttatggtctatgacttg
gacggtgacggaaaagcagaaatcgccatgaaaaccgctgacggcacaacagacgggaaa
ggacacatcatcggcgatgagcatgccgattataggaacgaacagggcagaatcctgtcc
ggtccggaatatttgactgtgtttaaaggagaaaccggtgaagcgctcacgaccgtggaa
tatgaaccgccccgcggaaagctggaagattggggagatggctacggaaaccgcatggac
cgttttctcgccgggatcgcgtatttggatggggagcggccgagcctcgtgatggcgcgc
ggctactatacgagagctgtactcgtggcatacgatttcagaaacggaaggctcaaaaaa
cgctggatatttgattccaatcagccgggccatgaagcgtatgctgggcagggcaaccac
agcttgagcgtggcagatgttgacggagacgggaaggatgaaatcatttacggcgccatg
gcggttgatcatgacggtacaggcttgtacacaacggggctcggacacggagacgcgatg
catgtaggggatctggatccgtcccgcaaagggcttgaagtgtttcaggtgcatgaggat
gcctcgaagccatacggactgtcgctgcgtgatgccggaaccggcgagattttatggggc
gttcatgccggaactgacgtcggcaggggcatggcggctcatatcgacccaaattacaaa
ggatcgctcgtctggggaattgatccgcctggcaatgacggaatgtcatacggccttttt
accagtaaaggagaaaagatcagtgacaaagcgcccgcctcagccaatttcgccatctgg
tgggacggcgacttggtcagggagctgcttgatcatgactgggacggaacggtcggcagg
ccgaagattgaaaagtgggatgctgaaaaccgctgtctgaagacgatttttcagccggac
ggcgtgctgtccaacaacggcacaaaaggaaatcctgttcttcaggccaacctgttcgga
gactggcgggaagaagtgatatggagaacggaagacagcagcgcactccgcatctataca
acgacacatctcacccgccatcgcttttacacgcttatgcacgatccggtttacaggctc
ggcatcgcctggcagaataccgcctacaaccagccgccgcacacgggcttttatctcgga
acgggaatgaaaaaaccaccgaagcccgccctgtacatagcgggcagcaaagcggaggcg
ccgctatag
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