Bacillus subtilis subsp. spizizenii W23: BSUW23_05195
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Entry
BSUW23_05195 CDS
T01302
Symbol
lcfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase (degradative)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Pathway
bss00061
Fatty acid biosynthesis
bss00071
Fatty acid degradation
bss01100
Metabolic pathways
bss01212
Fatty acid metabolism
bss02024
Quorum sensing
bss04146
Peroxisome
Module
bss_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BSUW23_05195 (lcfB)
00071 Fatty acid degradation
BSUW23_05195 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BSUW23_05195 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSUW23_05195 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bss01004
]
BSUW23_05195 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bss04147
]
BSUW23_05195 (lcfB)
Enzymes [BR:
bss01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BSUW23_05195 (lcfB)
Lipid biosynthesis proteins [BR:
bss01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BSUW23_05195 (lcfB)
Exosome [BR:
bss04147
]
Exosomal proteins
Exosomal proteins of breast milk
BSUW23_05195 (lcfB)
Exosomal proteins of breast cancer cells
BSUW23_05195 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ADM37092
UniProt:
E0TYP1
LinkDB
All DBs
Position
1062371..1063912
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AA seq
513 aa
AA seq
DB search
MNLVSKLEETASEKPDSIACRFKDRMMTYQELNEHIQRFADGLQEAGMEKGDHLALLLGN
SPDFIIAFFGALKAGIVVVPINPLYTPTEIGYMLTNGDVKAIVGVDQLLPLYESMHESLP
KVELVILCQTGDAEPEASDPEVRMKMTTFAKILRPTSAAKQSPEIVPDDTAVILYTSGTT
GKPKGAMLTHQNLYSNANDVAGYLGMDEKDNVVCALPMFHVFCLTVCMNAPLMSGATVLI
EPQFSPASVFQLVKQRQATIFAGVPTMYNYLFQHENGKKDDFSSIRLCISGGAAMPVALL
TAFEEKFGVTILEGYGLSEASPVTCFNPFDRGRKPGSIGTSILHVENKVVDPLGRELPDH
QVGELIVKGPNVMKGYYKMPMETKHALKDGWLYTGDLARRDEDGYFYIVDRKKDMIIVGG
YNVYPREVEEVLYSHPDVKEAVVIGVPDAQSGEAVKGYIVPKRSGVTEADIMQHCEKHLA
KYKRPAAITFLDDIPKNATGKMLRRALRDILPQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgtttccaaattggaagaaacagcatctgagaagcccgacagcatcgcatgc
aggtttaaggatcgcatgatgacgtatcaggagctgaatgaacacattcagcgatttgcg
gacggccttcaggaagccggtatggagaaaggggaccatctagctttgctgcttggcaat
tcgccggattttatcatcgcgttttttggtgcgttaaaggctgggattgtggtggtgccc
atcaacccgctgtacacgcccacagaaatcggttatatgctgacaaatggcgatgtaaag
gcgatcgtgggcgttgaccagcttttgccgctttatgagagcatgcatgaatcgctgcca
aaggttgagctcgtcattttatgccagacgggagatgccgagccagaagcttcagaccca
gaggtcaggatgaaaatgacaacgtttgcaaaaatattgcgtccgacatctgccgctaaa
caaagcccggagattgtccctgatgataccgcggtcattttgtatacgtcaggaacgacc
ggaaaaccaaaaggcgcaatgttgacccatcaaaatttgtacagcaatgccaacgatgtc
gccggctatttgggaatggatgagaaggacaatgtggtctgcgctcttcctatgttccac
gtgttttgtttaaccgtctgtatgaatgccccgctgatgagcggcgcaactgttttaatt
gagccacaattcagtccggcatctgtttttcagcttgtgaagcagcggcaggcgaccatt
tttgccggtgtgcctacgatgtataattatctgtttcagcatgaaaacggaaagaaagat
gacttttcgtccattcggctgtgcatttcgggaggtgcggcgatgccagtcgcgctgctg
accgcatttgaagaaaaattcggcgtgaccattttggaaggctacgggctttcggaagca
tcgcccgtgacgtgttttaacccgtttgacaggggcagaaagccgggctccatcgggaca
agtatcttacatgtcgaaaacaaggtcgtagatccgctcgggcgcgagctgcccgatcac
caggtcggcgaattgatcgtgaaaggccccaatgtgatgaagggctattataaaatgccg
atggaaacaaagcatgcgttaaaagacgggtggctttatacgggggatttggcaagaaga
gatgaggacggctatttttacattgttgaccggaaaaaagacatgatcattgtaggagga
tacaacgtgtatccgcgcgaggtggaggaagtgctgtacagccacccggatgtcaaggag
gcggttgtcatcggtgtgccggacgcccaaagcggggaagcggtaaagggatatattgta
ccaaaacgctctggcgtaacagaagctgatatcatgcagcactgtgaaaaacatctcgcc
aaatacaaacggcccgctgccattacgtttcttgacgacattccgaaaaatgcgacgggg
aaaatgctcagacgggcgctgagagatattttgcctcaataa
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