Bacillus subtilis subsp. spizizenii W23: BSUW23_08300
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Entry
BSUW23_08300 CDS
T01302
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bss03032
]
BSUW23_08300 (topA)
03400 DNA repair and recombination proteins [BR:
bss03400
]
BSUW23_08300 (topA)
Enzymes [BR:
bss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BSUW23_08300 (topA)
DNA replication proteins [BR:
bss03032
]
Prokaryotic type
DNA Topoisomerases
BSUW23_08300 (topA)
DNA repair and recombination proteins [BR:
bss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BSUW23_08300 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Zn_ribbon_3
Zn_ribbon_ACC
Toprim_3
Toprim_2
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ADM37708
UniProt:
E0TUA1
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Position
1640169..1642244
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AA seq
691 aa
AA seq
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MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLELDLNSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTIDGTFLKGQETFEASFFGKNGKKLPLKSEADVKDILSQLKGNKYTVEK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGREGTVGLITYMR
TDSTRISNTAVDEAAAFIDQAYGKEFLGGKRKPAKKNENAQDAHEAIRPTSVLRKPSELK
AVLGRDQMRLYKLIWERFVASQMAPAVLDTMSVDLTNNGLTFRANGSKVKFSGFMKVYVE
GKDDQMEEKDRMLPDLQEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVGLDNKRFVPTELGQIVLELIMEFFPEIINVEFTAKMEKDLDNVEEGN
IEWVQIIDNFYTDFEKRVKKAESEMKEVEIEPEYAGEDCELCSSPMVYKMGRYGKFLACS
NFPDCRNTKPIVKQIGVKCPSCGEGNIVERKSKKKRVFYGCDRYPDCEFVSWDKPIERKC
PKCGKMLVEKKLKKGIQVQCVECDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattatctagtcatcgtggaatcgcccgctaaggcgaaaacgattgaacgttac
ttaggtaaaaaatataaagtaaaagcatcaatgggacatgtccgggatcttccaaaaagt
caaatgggagttgacatagaacagaattttgaaccgaaatatattaccattcgaggtaaa
ggaccggtgttgaaagagctgaaaacagctgcgaaaaaagccaaaaaagtgtatctcgca
gccgaccccgatagagaaggggaagcgattgcatggcacttggcacacagccttgagtta
gatctcaattctgattgccgtgtggtgtttaatgaaattacaaaagatgccattaaggaa
tcgtttaagcatcctcgcatgatcaatatggatttagtggatgcacagcaggcgagacgt
attttagaccggcttgtcggatataaaatcagtcctatcctatggaagaaagtcaagaaa
gggcttagcgcaggccgtgttcaatccgttgccctccgtttgattattgaccgcgaaaaa
gaaattaacgactttaagccggaggaatattggacaattgacggtacgttcttgaaagga
caggaaacgttcgaagcgagctttttcggaaaaaacggcaaaaaacttcctttaaaaagt
gaagccgatgtaaaagacattctttctcagctcaaaggcaataaatacacagttgaaaaa
gtaacgaaaaaggaacgcaaacgtaatccggccttgccttttaccacttccaccctgcag
caggaagcggctcgcaagctcaatttcagagcgaagaaaacgatgatgattgcacagcaa
ttatatgaaggaattgatcttggaagagaaggaacggtcggtctgatcacgtatatgaga
acggattcaacccgtatttcaaatacggcggtggatgaagccgctgcatttattgatcag
gcatacggcaaagagttcttaggcggcaaacgaaagcctgcgaaaaagaatgaaaatgct
caggacgctcacgaagcgattcgcccgacatcagttctcagaaaaccaagtgaattaaaa
gcagtacttggcagagatcaaatgagattgtataaattaatttgggagcgctttgttgcc
agccaaatggcacctgctgttctcgatacaatgagtgtcgacctgacaaacaacggtttg
acttttcgtgcaaatggaagtaaagtcaagttttccgggtttatgaaggtgtatgttgaa
ggaaaagacgatcaaatggaagaaaaagaccggatgctgcctgacttacaggaaggcgat
acggtattatcaaaagatatagaaccggagcagcattttacccagccgcctccgcgctat
actgaggcccgtttggttaaaacgcttgaagaactcgggatcggccgtccgtccacttat
gctccgacccttgatacgattcagcggcgcgggtacgttggactggataataaacggttt
gttcccacagaattagggcagatcgtgcttgagctgatcatggaatttttccccgaaatc
attaacgttgagtttacggcaaaaatggaaaaagaccttgataatgttgaggaaggcaat
atagaatgggtacagattattgataacttctataccgattttgaaaagcgtgtgaaaaaa
gccgaatcagaaatgaaggaagttgaaattgaaccagaatatgccggagaagattgtgaa
ttgtgcagttctcctatggtgtataaaatgggccgatacggtaaattcttagcttgctcc
aatttccccgattgccgaaatacaaagccgattgtcaaacaaatcggtgtgaagtgtccg
agctgcggtgaaggaaatattgttgaacgaaaatcgaaaaagaaacgggtattttacggc
tgtgaccgttatccggactgtgaattcgtttcctgggacaaaccaattgaacgaaaatgc
ccgaaatgcggaaaaatgctcgtcgagaaaaaactcaaaaaaggcatacaagtccaatgt
gtggaatgcgattataaggaagaaccacagaagtag
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