Bacillus subtilis subsp. spizizenii W23: BSUW23_11305
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Entry
BSUW23_11305 CDS
T01302
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Pathway
bss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSUW23_11305 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bss03019
]
BSUW23_11305 (recQ)
03400 DNA repair and recombination proteins [BR:
bss03400
]
BSUW23_11305 (recQ)
Enzymes [BR:
bss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSUW23_11305 (recQ)
Messenger RNA biogenesis [BR:
bss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSUW23_11305 (recQ)
DNA repair and recombination proteins [BR:
bss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSUW23_11305 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
DUF6119
VIT1
Motif
Other DBs
NCBI-ProteinID:
ADM38301
UniProt:
E0U1X5
LinkDB
All DBs
Position
complement(2258808..2260298)
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AA seq
496 aa
AA seq
DB search
MTKLQQTLYQFFGFTSFKKGQEDIIRSILSGKDTIAMLPTGGGKSLCYQLPGYMLDGMVL
IVSPLLSLMEDQVQQLKARGEKRAAALNSMLSRQERQFVLEHIHRYKFLYLSPEALQSPY
VLEKLKNVPISLFVIDEAHCISEWGHDFRPDYSKLGQLRKKLGHPPVLALTATATKDTLQ
DVTNLLELQHAERHLNSVNRPNIAFRVENAADTAEKIDRVIQLVENLQGPGIVYCPTRKW
AEELAGEIKSKTSSRADFYHGGMESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIRY
VIHFHIPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMESVTAAEIADGIR
LLEKTDEQDERRLRDVLMQYGVGETQARMMIHLFMQGKTSIELMKQEISYRMELKLEKMH
RVSFLLQRNGCLRQSLLTYFDESYEPDDGNFPCCSHCGFDLSLYEQKGERSKMAPLDSWS
SELHRIFSLQTVGELN
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgactaaattacagcaaacgttatatcagttttttggttttacttcctttaaaaaaggg
caggaggacattattagaagcatacttagcgggaaggacaccattgcaatgcttccgact
gggggaggaaaatcgctttgctaccagctgcctggctacatgcttgacggtatggtatta
atcgtttctccattgctttctttaatggaggatcaggtacagcagctaaaagcacggggg
gaaaaacgtgcggccgctttgaatagcatgcttagcaggcaggaaagacaattcgttttg
gaacatattcatcgttataaatttttgtacttgtctcctgaggctttgcaatcgccatat
gtattggaaaaattgaaaaacgtcccaatcagcctcttcgttattgatgaagctcattgc
atatctgaatgggggcatgactttaggcctgactattcaaagctcggacaactgagaaaa
aaacttgggcatcctccggttctggcattgactgctacagctacaaaggatacgctgcaa
gatgtcacgaacctgctggagctacagcatgccgaacggcatctcaactcagtcaaccgc
ccaaacatcgcatttcgggtagaaaatgccgcggatactgccgaaaaaatagatagggtc
attcagctggttgaaaacctgcaaggaccgggaattgtttattgtccgacacggaaatgg
gctgaagaattagcgggggaaattaaaagcaagacgagcagcagagccgacttttaccat
ggcggtatggagtctggcgacaggattttaatacagcagcagtttatccataatcagctt
gatgtgatatgttgtacgaatgcgtttggaatgggtgtcgataaacctgatatcagatat
gtgattcatttccacatcccgcagacggctgaagcttttatgcaggaaatcggcagagcg
ggacgcgacggaaaaccgagtgtcagcattttgctgcgggcgccaggtgattttgaatta
caggagcagattatccaaatggagagtgtcacagctgcagaaatcgccgatgggatccgt
ttgcttgaaaagacggatgagcaggatgagagaaggttgcgtgacgtattaatgcagtat
ggtgtcggagagacacaggcccgtatgatgatacatctctttatgcaggggaaaacatca
attgaactgatgaaacaggaaatttcatatcgcatggagctgaagctggaaaaaatgcac
cgtgtatcttttctgcttcagcgtaacggctgtttaaggcaatcactgttaacctatttt
gatgaatcatacgagcctgatgacggaaattttccgtgctgttcacattgcggttttgat
ctatccttgtatgaacaaaaaggagaacggagtaaaatggcgccattagacagctggagt
tcggaattgcatcggatattcagcttgcagactgtaggtgagctgaactga
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