Bacillus subtilis subsp. spizizenii W23: BSUW23_13285
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Entry
BSUW23_13285 CDS
T01302
Symbol
yrrC
Name
(GenBank) putative exonuclease with DNA/RNA helicase motif
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Pathway
bss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BSUW23_13285 (yrrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bss03400
]
BSUW23_13285 (yrrC)
Enzymes [BR:
bss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BSUW23_13285 (yrrC)
DNA repair and recombination proteins [BR:
bss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BSUW23_13285 (yrrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
HHH_5
UvrD-helicase
UvrD_C
AAA_16
T2SSE
nSTAND3
AAA
DEAD
AAA_12
NPHP3_N
TsaE
AAA_28
NTPase_1
Rad17
Zeta_toxin
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ADM38695
UniProt:
E0TUJ9
LinkDB
All DBs
Position
complement(2596363..2598759)
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AA seq
798 aa
AA seq
DB search
MQQHPDQLKLEEEPYLKGTVNTVIYHNDTNLYTVLKVKVTETSEAIEDKAVSVTGYFPAL
QEEETYTFYGKIVTHPKFGLQFQAEHFKKEIPTTKEGIIQYLSSDLFEGIGKKTAEEIVK
KLGDSAINKILADASVLYDVPRLSKKKADTLAGALQQHQGLEQIMISLNQFGFGPQLSMK
IYQAYESETLEKIQENPYQLVKDVEGIGFGKADELGSRMGLSGNHPERIKAAILYTLETT
CLSEGHTYIETEQLIIDTQSLLNQSAREGQRITEMDAANAIIALGENKDIVIEDGRCYFP
SLFYAEQNVAKRVKHIANQTEYDDQFPESEFLLALGELEERMNVQYAPSQKEAIQKALSS
PMLLLTGGPGTGKTTVIRGIVELYGELHGVSLDPSAYKKDEAFPVVLAAPTGRAAKRMSE
STGLPAVTIHRLLGWNGAEGFTHTEDQPIEGKLLIIDEASMLDIWLANHLFKAIPDHIQI
IIVGDEDQLPSVGPGQVLRDLLASRVIPTVRLTDIYRQAEGSSIVELAHQMKNGLLPNNL
TAPTKDRSFIRCGGSQIKEVVEKVVANALKKGYTAKDIQVLAPMYRGKAGINELNIMLQD
ILNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEITSIFYAKENTEKEDMA
VVNFDGNEMTFTKKDFNQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAIT
RAKKFLILCGEEEALEWGVKNNDATVRQTSLKNRLSIQVEEMDAELEALQKELPFSVHDA
NIGMEGITPFDFMKEEQL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcagcatccggatcagcttaaactggaggaagagccctatttaaagggaacagtc
aacacagtcatctatcataatgacaccaatttatatacggttctgaaagtgaaagttaca
gagacctccgaagcgattgaagataaagccgtatccgtgacgggctacttccctgcgctt
caagaagaagagacctacacgttttacggaaagatcgtaacccatccaaaattcgggctc
caatttcaggcggagcatttcaaaaaggagatcccgacgactaaggaaggcatcattcaa
tatttatcgagtgatttgttcgagggaatcggcaaaaaaacagctgaagaaattgtgaaa
aagctgggcgacagcgcgattaataaaattttggctgacgcttcagtgctttatgatgta
ccgagactgtcaaaaaagaaagctgacacgctagccggtgcgttgcagcagcatcaggga
ctggagcaaatcatgatttccctgaatcagttcggctttggccctcagctgtctatgaaa
atctatcaggcctatgaatccgagacgcttgaaaagattcaggaaaacccttatcagctt
gtgaaagatgtagaagggatcgggtttgggaaagcggatgagcttggcagcagaatgggg
ctttcgggtaatcatcctgagcggataaaagccgcgattttgtacacgcttgaaacgact
tgtctgtcagaagggcatacgtacatagaaacggagcagctgattatcgacacccaatca
ctgttgaaccagtcagcaagggaaggacagcgtatcacagaaatggatgccgctaacgcg
attattgcccttggagaaaataaagacattgtcatagaagacggccgctgttattttcca
tcgctgttttacgcagaacaaaacgttgcaaagcgtgtgaaacatatcgcaaaccaaact
gaatatgatgaccagtttcctgaatcagaatttctgcttgctttaggcgaactggaagaa
cggatgaacgttcagtatgccccgagccagaaggaagcgattcaaaaagccctttcctca
ccgatgcttcttttaacgggaggcccaggaacagggaaaacgacggtaatcagaggaatt
gtcgaactgtacggggagcttcacggcgtgtcactagacccgtcagcttataaaaaggat
gaagcttttccggttgtattggccgcaccgacaggaagagcggcaaaacgaatgagtgaa
tcaacgggccttccggcagtcacgatacacaggctgcttggttggaacggcgcagaaggc
ttcacccatacagaggatcagccgatcgagggaaagctgttaattatcgatgaagccagt
atgcttgatatatggctggcgaaccacttgttcaaggcgatccctgatcatattcaaatc
atcattgtgggagacgaagatcagctgccttctgtcggtccgggccaagtgctgagagac
cttttggcatcccgggtgattccgactgtgagactgacagacatctaccgccaggcggag
gggtcatcaatcgtcgagcttgcccaccagatgaaaaatggattgctgccgaacaatttg
actgcacctacaaaggaccgttcttttattcgctgcggtggctcgcaaataaaagaagtg
gttgaaaaggttgtcgccaatgcattgaaaaaaggctatacggcaaaggacatacaggtt
ctcgccccgatgtacagaggaaaagccggcatcaatgaactgaatataatgctgcaggat
attttaaatcctcctaaagaaaaacggagagaattgaagttcggagatgttgtctacaga
accggagataaaattttgcagctcgtcaatcagccggaaaacaatgtattcaacggagat
attggggaaattacgtcgatattttatgcgaaggaaaatacagaaaaagaagacatggcc
gttgttaattttgacggcaatgaaatgacatttacgaaaaaagattttaaccaatttacc
catgcgtattgctgctctattcataaatcgcagggaagtgaatttccgattgtggttttg
cctgttgtgaaaggctactatagaatgctcagaagaaatcttctttataccgcgattacg
agagcaaagaaatttctcattttatgcggggaagaggaggcgctggagtggggcgtaaaa
aataatgacgcaactgtcagacagacttccttgaaaaacaggttgtcaatacaggttgag
gaaatggatgccgagcttgaggctttgcaaaaagagctcccgttcagtgtacacgatgcc
aatattggcatggaaggcattacaccattcgattttatgaaagaagaacagctataa
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