Bacillus subtilis subsp. spizizenii W23: BSUW23_18305
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Entry
BSUW23_18305 CDS
T01302
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Pathway
bss03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSUW23_18305 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bss03021
]
BSUW23_18305 (rho)
03019 Messenger RNA biogenesis [BR:
bss03019
]
BSUW23_18305 (rho)
Transcription machinery [BR:
bss03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BSUW23_18305 (rho)
Messenger RNA biogenesis [BR:
bss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BSUW23_18305 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
AAA_22
AAA
NACHT
EZH2_WD-Binding
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADM39696
UniProt:
E0TUS6
LinkDB
All DBs
Position
complement(3613081..3614364)
Genome browser
AA seq
427 aa
AA seq
DB search
MKDVSISSLENMKLKELYELARHYKISYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPDRQMVLETKPNFLSTRIMDMMAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITANQPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLVPKEHLDRLWSIRKTMSDSPDFAEKFMRKMKKTKTNQEFFDILNQEWKQA
NLSSARR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgtatctatttcatctttggaaaatatgaaattgaaagagctttatgaactt
gcaagacattataaaatctcctattacagcaaactgacaaaaaaagaactcattttcgcc
attctgaaagcaaatgcagaacaggaagatctgctgtttatggaaggtgttcttgagatc
atccagtccgaaggtttcggtttcctgagaccgatcaactactctccaagctcagaggac
atttacatctcagcttcacaaatccgccgtttcgatttgcggaacggagacaaagtatcg
ggcaaggttcgcccgccaaaagaaaatgagcgttactatggacttttgcacgttgaagca
gtaaacggggatgatcccgaatcagcaaaagagcgtgtgcatttcccggctcttacacct
ctttatccagaccgtcaaatggtgcttgaaacaaagccaaacttcttgtctacaagaata
atggacatgatggcaccggttggatttggacagcgcggtttgattgttgcgcctccaaaa
gccggaaaaacgatgctgctgaaggaaattgccaacagcattacagcaaaccagcctgaa
gcagagctcatcgtgcttttgatcgacgaaagaccagaggaagtgaccgatatcgagcgt
tccgtagctggggatgtcgttagctcaacgtttgatgaagtgccggaaaaccatattaaa
gtggccgagcttgtgcttgagcgcgcgatgcgtctcgtggaacacaaaaaagatgtcatc
atcctgatggacagcatcacacgccttgcccgcgcctacaacttagtgattccgccgagc
ggaagaacgctttctggggggattgatccagcagcgttccaccgtccgaaacgcttcttc
ggggctgcgagaaatatcgaagagggcggcagcttaactatccttgctacggctcttgtt
gatacagggtcacgtatggatgatgtcatttatgaagaattcaagggaacaggcaacatg
gagcttcaccttgaccgttctctggcagagcgccgcatcttcccggccatcgatatccgc
cgttcgggaacgcgcaaggaagagctgcttgtgcctaaagagcaccttgatcgtttatgg
tctatccgcaaaacgatgtctgattcacctgatttcgcagaaaaattcatgagaaaaatg
aaaaaaaccaaaacaaaccaggaatttttcgatattctcaatcaagaatggaaacaggca
aatctatcatctgctagacgataa
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