Bacillus subtilis subsp. spizizenii W23: BSUW23_19000
Help
Entry
BSUW23_19000 CDS
T01302
Symbol
ywbD
Name
(GenBank) putative AdoMet-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
bss
Bacillus subtilis subsp. spizizenii W23
Brite
KEGG Orthology (KO) [BR:
bss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bss03009
]
BSUW23_19000 (ywbD)
Enzymes [BR:
bss01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
BSUW23_19000 (ywbD)
Ribosome biogenesis [BR:
bss03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BSUW23_19000 (ywbD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
PUA
TRM5-TYW2_MTfase
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ADM39834
UniProt:
E0TWP8
LinkDB
All DBs
Position
complement(3744872..3746059)
Genome browser
AA seq
395 aa
AA seq
DB search
MKLLTLKQAHAAKIKKGYPLIDKEALAGSAGHVKEGDLVDIMSESGEFLARGYYGLQNKG
VGWTLTRNKQEQIDQAFFLSKLSKAVQARTKLFAAQDTTAFRLFNGEGDGVGGVTIDYYG
GYLLVQWYSKGIYTFKDMLISALDELDLDYKAIYEKKRFDTAGQYVEDDDFVKGKRGEFP
IIIQENGIQYAVDLNEGAMTGIFLDQRHVRKAIRDRYAKGKTVLNTFSYTGAFSVAAALG
GAEKTTSVDVANRSMAKTIEQFSVNKLDYEAHDIKVMDVFNYFSYAAKKGLRFDLIILDP
PSFARTKKRTFSAAKDYKNLLKETIAITADKGIIVASTNSSAFGMKKFKGFIDAAFKETN
ERYTIIEEFTLPEDFKTISSFPEGNYLKVVFLQKK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagctactcactctaaaacaagcacatgctgcaaaaatcaaaaaaggctatccgctc
atcgataaggaagctctcgcagggagtgcggggcacgtgaaagaaggagacctcgttgat
atcatgtcagagagcggcgagtttctcgcgcgaggttactatggcctgcaaaacaaaggg
gtcggctggacgcttacccgcaataaacaagaacagattgaccaagcattttttctcagc
aaattatcaaaagcggtccaagcacgcaccaaactattcgctgcccaagatacaacagca
ttccgcctgttcaatggtgagggagacggcgtcggcggcgtcacgatcgactattatggc
ggctacctgctggttcaatggtacagcaaaggcatttacacctttaaagacatgctgatt
tccgctttggatgagctggatcttgattataaagcgatttacgagaaaaaacgcttcgac
acggctggacaatacgttgaagatgatgacttcgtgaaagggaaaagaggcgagttcccg
atcatcattcaggaaaatggcattcaatacgcggtggatctgaatgaaggcgccatgacg
ggcatctttttggatcaaagacatgtgcgcaaggcgatcagagaccgctatgcaaaagga
aaaacagtgttaaatacgttttcttatacgggtgcattctccgtggcagcagcgcttggc
ggagcggagaaaacaacaagcgtggacgtggcaaaccggagcatggccaaaacgatcgag
caattcagcgtaaacaaacttgattacgaggcacacgacattaaagtgatggacgtgttt
aactatttttcatatgcggcgaaaaagggtctgcgttttgatctaattattctcgatccg
ccttcctttgcacgcacaaaaaaacgcaccttcagcgcggccaaggattataaaaacctg
ctgaaggaaacgatcgctatcacagctgacaagggcatcatcgttgcttccacaaacagc
agcgccttcggcatgaagaaattcaaaggctttatcgatgccgcctttaaagaaacaaat
gaacgttacacgatcattgaggaatttacgctgccggaggatttcaaaacgatttcatcg
tttcctgaaggcaactacctaaaagtagtctttctgcagaaaaaataa
DBGET
integrated database retrieval system
