Bacillus spizizenii TU-B-10: GYO_0965
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Entry
GYO_0965 CDS
T01635
Name
(GenBank) FG-GAP repeat domain protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
bst
Bacillus spizizenii TU-B-10
Brite
KEGG Orthology (KO) [BR:
bst00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
GYO_0965
Enzymes [BR:
bst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
GYO_0965
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
AEP85647
UniProt:
G4NR97
LinkDB
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Position
883252..885096
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AA seq
614 aa
AA seq
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MIKRRKRIFTAVTLLVLLVMGASVCPVKAEGAARQMEALNRGLVAVKTDGGIFVSWRFLG
TENASVSFNVYRDGQKLNAAPVKTTNYVDKNGSAGSTYTVRAVVNGTEQAASEKASVWAQ
PYHSVPLDKPAGGTTPKGEAYTYSANDASVGDVDGDGQYELILKWDPSNSKDNSQDGYTG
DVLIDAYKLDGTKLWRINLGKNIRAGAHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKV
IGNATADYRNEQGRVLSGPEYLTVFQGATGKELVTTNFEPARGNVSDWGDSYGNRVDRFL
AGIAYLDGQRPSLIMTRGYYAKTALVAYNFRDGKLSKLWTFDSSKSGNEAFAGQGNHSLS
IADVDGDGKDEIIFGSMAVDHDGKGMYSTGLGHGDALHTGDLDPSRPGLEVFQVHEDKNA
KYGLSFRDAATGKILWGVHAGKDVGRGMAADIDPRYPGQEVWANGSLYTAKGVKIGSSVP
SSTNFGIWWDGDLLREQLDSNRIDKWDYQNGVSKNMLTASGAAANNGTKATPALQADLLG
DWREEVVWRTEDSSALRIYTTTIPTEHRLYTLMHDPVYRLGIAWQNVAYNQPPHTSFFLG
EGMAEQPKPNMYTP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacgaaggaaacgcatatttaccgctgttacgttgctggtcttgttggtgatg
ggagcctctgtatgtcctgtgaaagcagaaggagcagcgcggcagatggaagcgctgaac
cgggggcttgtggcggtcaagacggacggcggcatttttgtcagctggcggtttcttggc
actgaaaacgcatctgtttcgttcaatgtgtacagagacggacaaaagctgaatgctgcg
cctgtcaaaaccacgaactatgtggataaaaacggatcggcgggctcaacgtatacggtt
cgggctgtcgtaaacggtaccgaacaggcggcttctgaaaaagcctccgtatgggcgcag
ccgtatcattccgtcccgctggataaaccggctggcggcacgacgccaaagggtgaagct
tacacctacagcgccaatgacgcaagtgttggcgatgtggatggtgacgggcaatacgag
ctgatcctgaaatgggacccgtctaattcaaaggacaactcacaggatggctatacgggt
gacgtactgattgacgcctataaacttgacggaacgaagctatggcggatcaatctcggc
aaaaacatcagagcgggagcgcactacacccagtttatggtgtatgaccttgatggtgac
ggaaaagcggaagtggcgatgaaaacggcagacgggacaaaagacggcacgggcaaagtg
attggaaatgccactgctgattacagaaatgaacaggggcgtgtgctttcagggccggaa
taccttactgtgtttcaaggtgcaaccgggaaagagcttgtcacaacaaactttgaaccg
gcccgcggcaatgtgtcagattggggagacagctacggcaaccgggttgaccgttttctc
gccggcattgcctacctcgacggacagcggccgagcctgatcatgaccagagggtattat
gccaaaaccgcgcttgtcgcctataacttcagagacggaaagctgtcaaagctttggacg
ttcgattcttcgaagtctggaaatgaggcgtttgccggacaggggaatcacagcctgagc
atcgctgatgttgacggggacggaaaggatgagatcattttcggctcaatggctgttgat
catgatggaaaaggcatgtattcaactggcttaggccacggggatgccctccataccggg
gatcttgatccgagccggccgggtcttgaggtgtttcaagttcatgaggacaaaaatgca
aaatacggcttatccttccgtgatgcggcaaccggaaaaatcctttggggcgttcatgca
ggcaaggatgtaggccgggggatggctgctgatattgacccgcgttatccgggacaggaa
gtgtgggcaaacggttctctttacacagcgaaaggcgtcaaaatcggaagcagtgttccg
tcatcgaccaacttcggcatctggtgggacggcgacttactgcgggaacagctggacagc
aaccgaatcgataagtgggattatcaaaacggtgtatcgaaaaatatgctgactgcatca
ggcgcggccgccaacaacggcacaaaggcaacgccggcacttcaggctgatctgcttggg
gactggcgtgaggaagtcgtgtggagaacagaggacagcagtgcgctccgcatttacacg
acaaccattccgactgagcataggctgtacacgctgatgcacgatcctgtgtaccggctt
ggcatcgcctggcaaaatgtcgcgtataaccagccgccgcacacaagcttctttttagga
gagggcatggcggaacagccaaaaccgaatatgtatacaccttaa
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